Shewanella glacialimarina: FJ709_16015
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Entry
FJ709_16015 CDS
T07885
Name
(GenBank) cryptochrome/photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgla03400
]
FJ709_16015
Enzymes [BR:
sgla01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
FJ709_16015
DNA repair and recombination proteins [BR:
sgla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
FJ709_16015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPRP
MMS19_N
Rad1
Motif
Other DBs
NCBI-ProteinID:
UCX05856
LinkDB
All DBs
Position
complement(3672918..3674486)
Genome browser
AA seq
522 aa
AA seq
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MKSAKRLRLILGDQLNASHSWFREKDQHTLYVIAELHQEASYTQHHAQKISAFFAAMSQF
ASALEQAGHCVLHLTLDDTAQYQDLPALLTALFQRYSVTEFEYQLADEYRLRKQLDTFTQ
GLTITATSYESEHFYLTDAELSDYFQQDKRHRLEHFYRKMRLRFNVMMQGTEPAGGQWNF
DQQNRQKLKPKDFASVPEPLLFSNDVTSIWERIQRHNIHTLGEVNTTLLWPVNRQQALSL
LDHFCRFCLVRFGQFQDAMTAKLDTLGESKQWTLYHSRLSFALNTKMISPQCVVNTAIAH
FESSNGEITLAQIEGFVRQIIGWREFVRGIYWANMPNYSKLNALGASRALPDWFWTGNTK
MNCQHHAIKQSLEYAHAHHIQRLMVTGNFCLIAGIQPDEVDAWYLGIYIDAIEWVEMPNT
RGMSQFADGGIVGSKAYAASGNYINKMSDYCGDCVYQVTKAHGANACPLNSLYWHFMSRH
QNDFSANPRTKMVYANWLKKPAEDRQIILDHAEHLLANLSAL
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcagcaaaaaggttgcggttaattttaggcgaccaacttaatgcatcgcattct
tggtttcgtgaaaaagatcaacatactttatatgttattgccgagctgcaccaggaagcc
agttatacccagcatcatgcccaaaaaatatcagccttttttgctgctatgtcacaattt
gccagtgcacttgaacaggcgggccattgtgtattgcacctaaccttagatgacactgcg
caatatcaagacttaccagcattactgacggccttatttcagcgttacagtgttactgag
tttgaatatcaacttgctgatgaataccgcttacgcaagcaacttgatacttttactcaa
gggttaactatcacagcaacatcttatgagagcgagcatttttatttaacggatgctgag
ttgtctgactattttcaacaggataaaagacatcggctagaacacttttaccgtaaaatg
cggctacgatttaatgtgatgatgcaagggactgaacctgctggaggccaatggaatttc
gatcagcaaaatcgtcaaaaattaaaacccaaagactttgcttctgtacctgaacccttg
ttatttagtaatgatgtcacatcaatatgggaacgaattcaacggcataacatccatacc
ctaggtgaagtgaataccaccctgttgtggccagtgaaccggcaacaagcattatcactt
ttagatcatttttgccgcttttgtttagtcagattcggacagtttcaagatgcaatgacg
gctaaattagatacattgggtgaatctaagcagtggaccctttatcattcacggttgtcc
ttcgcccttaatactaaaatgatcagtccccaatgcgttgttaatactgctattgcacat
tttgagtcgtctaatggcgaaataaccctagcgcaaatagaggggtttgtgaggcaaata
atcggttggcgcgagtttgtgagggggatttactgggccaatatgccgaactattccaag
ctaaatgcacttggcgcatcaagggcgctacctgattggttttggaccggcaatactaaa
atgaactgccagcaccatgcaattaagcaatcgcttgaatatgcccatgcacatcatatt
caacggctgatggtaacaggcaacttttgtttaatcgccggcattcaacccgatgaggtc
gatgcctggtatttaggcatttatatcgatgctattgagtgggttgaaatgcccaatacc
agaggcatgagtcaatttgctgacggcggtattgtaggctccaaagcctatgcggccagt
ggtaactacattaataaaatgagtgattactgcggtgactgtgtctatcaagtcacgaag
gcgcacggcgccaatgcttgtccgctgaactcattatattggcactttatgagccggcat
caaaatgactttagcgcaaatccacgcactaaaatggtctatgccaattggttaaaaaaa
ccagcggaagatcgccagattattttagaccatgcggaacacttattggctaatttatca
gcgctataa
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