Shewanella glacialimarina: FJ709_16535
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Entry
FJ709_16535 CDS
T07885
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00730
Thiamine metabolism
sgla01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
FJ709_16535 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgla03009
]
FJ709_16535 (rsgA)
Enzymes [BR:
sgla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
FJ709_16535 (rsgA)
Ribosome biogenesis [BR:
sgla03009
]
Prokaryotic type
GTPases
FJ709_16535 (rsgA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
FeoB_N
GTP_EFTU
PduV-EutP
nSTAND1
AAA_29
ABC_tran
Arf
MMR_HSR1_Xtn
AAA_16
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
UCX05951
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All DBs
Position
3791181..3792251
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AA seq
356 aa
AA seq
DB search
MSKKKPLSQGQLRRMRANQSKRLNRTDSASDSADIQDHLLTPEQAGVVISRFGQHADIET
QDGIITRCNIRRAVTSLVTGDKVIVRLATEVQSNANIGGIVEAVHPRKSSLTRPDLYDGV
KIIAANIDQILIVSSVLPSFTTQIIDRYLVACEDTDIAPVIVLNKIDLLNDENRPEIEQA
LARYRDIGYQVYQLSSHTGEGIADLKDLLKDKVSVFAGQSGVGKSSVINALMPEADLLIG
DVSGNSGLGQHTTTTAKLLHFASGGDLIDSPGVREFALWHLDAQRVGWCFIEFREFLGTC
KFRDCKHGDDPGCALQTALKEGKITQDRFYNYNRIIASLDEQRHARHFRAIDDISK
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaagaaacccctaagccaaggccaattaaggcgcatgcgtgcaaatcaatca
aaacgattaaatcgcaccgattcagccagcgacagtgctgatattcaagatcatttatta
acacctgaacaagccggtgtggtgatatctcgtttcggtcaacatgctgatattgaaacc
caagacggcattataacccgctgcaatattcgccgcgcggtcaccagtttagttacaggt
gacaaggttattgtacgtttagccactgaagtgcaatcaaacgccaacattggcggcatt
gtggaggctgttcatccgcgaaaatcatctcttacacgccctgatttatatgatggcgtg
aaaattattgccgccaatattgatcaaattcttattgtgtcatcggtattacctagtttc
actacccaaattattgatcgctatctggtggcctgtgaagacactgatattgcaccggtt
attgtgctaaacaaaatcgatttattgaatgatgaaaaccgccctgagattgaacaagcc
ttagcccgctatcgcgacattggttaccaagtgtatcaactgagtagccataccggtgaa
ggcattgcagatcttaaagacttactaaaagataaagtcagtgtgtttgcaggacaatct
ggcgtcggtaaatcatcggtcattaatgcattaatgcctgaagctgacttacttatcggc
gatgtgtctggtaattctggtttaggtcaacacactactacaaccgcaaaactattacac
tttgccagtggcggcgatttaatcgactctccgggtgtgcgtgagtttgctctgtggcat
ttagatgctcaacgagtgggatggtgttttattgaatttagagagtttttaggtacttgt
aagtttagagactgcaaacatggagatgacccgggatgtgcgctacaaacggctttaaaa
gaaggcaaaattacccaagacaggttttataactataaccgtattattgctagccttgat
gaacagagacatgcacgacactttcgtgccattgatgatatttcgaaataa
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