Shewanella glacialimarina: FJ709_16810
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Entry
FJ709_16810 CDS
T07885
Name
(GenBank) 23S rRNA pseudouridine(2604) synthase RluF
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sgla03009
]
FJ709_16810
Enzymes [BR:
sgla01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
FJ709_16810
Ribosome biogenesis [BR:
sgla03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
FJ709_16810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UCX06000
LinkDB
All DBs
Position
complement(3857971..3858693)
Genome browser
AA seq
240 aa
AA seq
DB search
MAQYRLAHYLALCGIASRRQCSRIIEASRVTINGCLALHSTVIDTDFIDDIRVDDVKVLK
PEDKVYWLYHKPVGVDCRLIESDPSSLLHHLPKGPRLYPAGRLDKDSRGLLLLTNDGQLT
QRLMHPDFHHSKTYHVSVDKPFDELFLTKMAAGVTYHQASQNVTTRACLVKSLASVQFEI
VLTQGLNRQIRKMCQTLGYRVIDLKRVAIGEVELGDLPETKRRPLTAAELSMLMQPIGVT
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatatcgtttagcccattaccttgccctttgcggcatcgcctcaaggcgtcaa
tgttcaagaattattgaggctagtcgagtcactattaatggctgtttagctttacattca
acggttattgatactgattttattgatgatattcgtgtcgacgatgtaaaagttcttaag
cctgaagataaagtctattggttatatcataagcctgtaggagtcgattgtcgtttaatt
gaaagcgaccctagtagtttactgcatcacttacctaaagggccaagattgtatcctgca
gggcgattagacaaagattcccgaggactattattactcaccaatgacggtcaattaacc
cagcgattaatgcatcctgattttcatcattcaaaaacctatcatgtcagtgttgataaa
ccttttgatgagctgtttttgacgaaaatggcagcgggcgtgacctatcatcaagccagt
caaaacgtcacgactcgagcgtgcctggtaaagtctttggcttcggtacaattcgaaata
gtattgacccagggattaaaccgacagatccgtaaaatgtgtcaaacactaggctatcgg
gtgattgatttaaagcgagtcgcgattggggaggtagaattaggtgatttgccagaaaca
aaacggcgaccgttaacggccgccgaattaagcatgttaatgcaaccaataggcgttact
taa
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