Shewanella glacialimarina: FJ709_17120
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Entry
FJ709_17120 CDS
T07885
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sgla
Shewanella glacialimarina
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgla03019
]
FJ709_17120 (rapZ)
Messenger RNA biogenesis [BR:
sgla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FJ709_17120 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
Integrase_1
SKI
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
UCX06060
LinkDB
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Position
3926767..3927624
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AA seq
285 aa
AA seq
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MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGRLLEQLRNTNELVAISVDVRNI
EEQGKVLQQQLAWLSKDTEVISFFLQASDEALLKRYSETRRLHPLSKKNMSLQDAIQFEG
KLLAPISEYVDHFIDTSKLNIYQLSDQVREILMGSVDKELVINFESFGFKYGMPAEADFM
FDVRFLPNPHWEIELRPFTGLDEPVQEFLGQQPLVNKFIWQIENLFETWMPHLERNNRSY
LTIAIGCTGGQHRSVYIADQLAKRFSSGKKHVVQARHRELINKHK
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagtcattgtatccggtcgttcgggctcaggtaaatctgtcgcacttagggta
ctagaagacctgggttactattgcgttgataacttaccactgcccttaattggacgacta
ttagagcagcttagaaacaccaatgaactggtggccataagtgttgatgttagaaatata
gaagagcaaggtaaagtattacagcagcagcttgcgtggttatctaaggatactgaagtc
ataagcttttttttacaggcaagtgatgaagccctactaaaacgttacagtgaaacccgc
agactacatccattatcgaaaaagaatatgtccctacaggatgcgattcaatttgaaggt
aagctactggcgcctatttctgaatacgtagaccattttatcgacacatctaagttaaat
atttatcaacttagtgatcaagtacgtgaaattttaatgggcagtgttgataaagagtta
gtgatcaattttgagtcatttggttttaaatatggtatgcccgccgaagccgattttatg
tttgatgtacgctttttacctaacccacattgggaaatagaattacgtccctttactgga
ttagatgaacccgtgcaggaatttcttggccagcaaccgctggtaaataaattcatttgg
caaatagaaaacctatttgaaacatggatgccccacttagagcgcaataaccgcagctac
ctaaccatagctattggttgtactggtggccagcatcgttcagtttatatcgccgaccag
cttgctaaacgtttttcaagtggtaaaaaacatgttgttcaagcaaggcaccgagagctt
ataaacaagcataaataa
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