Shewanella glacialimarina: FJ709_18015
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Entry
FJ709_18015 CDS
T07885
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgla
Shewanella glacialimarina
Pathway
sgla00061
Fatty acid biosynthesis
sgla00071
Fatty acid degradation
sgla01100
Metabolic pathways
sgla01212
Fatty acid metabolism
sgla02024
Quorum sensing
sgla04146
Peroxisome
Module
sgla_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgla00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FJ709_18015
00071 Fatty acid degradation
FJ709_18015
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FJ709_18015
09145 Cellular community - prokaryotes
02024 Quorum sensing
FJ709_18015
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgla01004
]
FJ709_18015
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgla04147
]
FJ709_18015
Enzymes [BR:
sgla01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FJ709_18015
Lipid biosynthesis proteins [BR:
sgla01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FJ709_18015
Exosome [BR:
sgla04147
]
Exosomal proteins
Exosomal proteins of breast milk
FJ709_18015
Exosomal proteins of breast cancer cells
FJ709_18015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UCX06225
LinkDB
All DBs
Position
4134036..4135691
Genome browser
AA seq
551 aa
AA seq
DB search
MNNAIKTPVEMLAHWVETHGEKVYLRQPINGSYNDFTWREVQQKVQQIAGALRHLGLVPG
DKVAILSKNCAEWFITDLALMLGGYISVPIYPTANADTIRYVLEHSGTKAIFIGKLDYWA
DQEAGVGGEILRLAMPYDTMPAQYQWDQLLSLGQPLVDAKYPTPDTTMTIIYTSGSTGKP
KGAIHTFANYSWTCEAVVRDLQTNTADRLLSYLPLAHITERIAMEGSSFYSGSTVAFVES
LDSFVEDVKRCRPTVFFSVPRLWTLFQLNIVNKIGASKLNFLLKLPIINSIIKRKIQKGL
GLEHCRLLGSGSAPIPPTLIKWYHSIGMNICEAWGMTENCAYSIINYPFNADKIGTVGRA
IEGCQVRRTEQGELLVKSPGLMKGYYLQDEATAAAFDEDGFFHTGDLCEIDSDGYIDITG
RVKDNFKTSKGKYVAPVPIERKLAQDPHVELICVIGSGLPHPVALVQLSEGANLQSREEV
RTSLKATLDSINPNLESHEHVDAIIVVKEPWTIENDVLTPTLKIKRHVLEKAFSAKVEGV
RGAKIRWEDEL
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaataatgcaattaaaacacccgttgaaatgcttgcgcattgggttgaaacacacggc
gaaaaagtatatttacgccagccgattaatggcagctataacgacttcacctggcgcgaa
gtacaacaaaaagttcaacaaatcgcaggcgcattacgtcatctgggtttagtacccggc
gataaagtggctattttatctaaaaactgtgccgaatggtttattacggacttagcctta
atgctaggcggttacatcagcgtacctatttaccctaccgccaatgccgataccattcgc
tatgtgttagaacacagtggcactaaggctatttttatcggtaagttagactactgggca
gaccaagaagccggtgtcggtggtgaaattttacgcctagccatgccctatgacactatg
ccagctcagtatcaatgggatcagttattgtcattaggtcagcctctagttgatgctaaa
tatccaacgcccgacaccactatgaccatcatttatacctcaggctcaacaggtaagccc
aaaggcgctattcatacctttgctaattacagttggacctgtgaggctgtagtgcgtgat
ttacaaaccaatactgccgatagactactatcttacttgccattagctcacatcactgaa
cgtattgccatggaagggtcctctttctactcaggctcaacggtagcgtttgttgaaagc
ttagatagctttgttgaagacgtaaaacgttgtcgcccaacggttttcttttcagtaccc
cgcttatggaccttattccaacttaatattgttaataaaattggcgcaagcaaacttaat
tttctgcttaaattgcctattatcaatagcattattaaacgtaaaattcagaaaggcttg
ggcttggagcattgccgtttactcggttcagggtcagcacctattccaccgacgttaatt
aagtggtatcacagtattggcatgaatatttgtgaagcatgggggatgaccgaaaactgc
gcttattcgattattaactacccttttaatgccgataagattggcactgtcggccgcgca
attgaaggctgccaagttcgccgtaccgaacaaggtgaattattagtaaaaagtcctggt
ttaatgaaaggatattatttacaagatgaagccactgctgcggcatttgatgaagatgga
tttttccatactggcgatttatgtgaaatagacagtgatggttatattgacattaccggt
cgagttaaagacaacttcaaaacatcaaaaggcaaatacgttgcgccagtgcctatcgag
cgcaaactggcccaagatccacacgtagagttaatctgtgttatcggttcaggtctacct
cacccagttgccctagtacaattgtctgaaggcgccaatttacaatcacgtgaagaagtg
cgtacctcattaaaagcaaccttagacagcattaaccctaatcttgaatcccatgaacat
gttgatgcaattattgtcgtcaaagaaccatggactatcgaaaatgatgtattaacccca
acccttaaaattaaacgtcatgtgcttgaaaaagcctttagcgctaaagtggaaggtgtt
cgtggtgcaaaaattcgctgggaagatgagctataa
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