Sphingomonas glaciei: M1K48_00570
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Entry
M1K48_00570 CDS
T08593
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M1K48_00570 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sglc03019
]
M1K48_00570 (pnp)
03016 Transfer RNA biogenesis [BR:
sglc03016
]
M1K48_00570 (pnp)
Enzymes [BR:
sglc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
M1K48_00570 (pnp)
Messenger RNA biogenesis [BR:
sglc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
M1K48_00570 (pnp)
Transfer RNA biogenesis [BR:
sglc03016
]
Prokaryotic type
tRNA degradation factors
M1K48_00570 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_PDCD11
DUF7999
SdnP
DUF2152
Motif
Other DBs
NCBI-ProteinID:
UUR08176
UniProt:
A0ABY5N0P4
LinkDB
All DBs
Position
complement(128704..131103)
Genome browser
AA seq
799 aa
AA seq
DB search
MFNINTVEVDLGGKTLKLETGRIARQADGAVLATMGETVVLCAVTAAKSVKPGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEKETLTSRLIDRPIRPLFPEGFYNEVLVIAQVLSY
DGENEPDMVAMCAASAALTISGVPFMGPIGAARVGYIDGEYILNPTQEQVKTGELDLVVA
ATGNAVMMVESEAKELSEEVMLGAVVFAHEASKKVVNAICDLAEKAAKDPWDLKQADDKA
ATKAKLKELIGADIAAAYKVTAKGERSDLINAARAKAKEAFADAEPQEQLVAAKLVKVLE
ADIVRTAILEEGRRIDGRNTTTVRPIEAMVGFLPRTHGSALFTRGETQAICTTTLGTKDA
EQMIDGLEGLSYQRFMLHYNFPPYSVGEVGRFGAPGRREVGHGKLAWRALHPVLPTTEEF
PYTIRVLSDITESNGSSSMATVCGGSLSMMDAGVPLARPVAGIAMGLILEGEKFAVISDI
LGDEDHLGDMDFKVAGTDQGITTMQMDIKVAGITKEIMQVALAQAKEGRAHILGEMAKAL
DSTRGELSAHAPRIETMQIPKDKIREVIGTGGKVIREIVATTGAKVDIDDEGLIKISSSD
VTQIEAARQWIQGITQEPEPGTIYTGKVASIVDFGAFVTFMPGKDGLVHVSEIKNERVEN
VRDILTEGQEVKVKLLEVDNRGKVRLSMRVVDQETGAELEDTRPPREPREGGDRGPRGDR
GPREGGRGGDRHREGRGPRRDGGDRGGRDGGSDRGPRGEGRGGEGRGDRGPRREGGRDDN
GPAPEFAPAFLTGGNNNDD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatatcaacaccgtagaagtcgatctcggcggcaagacgctcaagctcgagacc
gggcgtatcgcccgccaggccgatggcgccgtgctcgccaccatgggcgaaaccgtcgtc
ctgtgtgccgtcaccgccgccaagagcgtgaagcccggccaggacttcttcccgctgacc
gttcactatcaggagaagttctccgcagccggccgcatcccgggcggcttcttcaagcgt
gagcgcggcgcgaccgaaaaggagacgctgaccagccgtctcatcgatcgcccgatccgc
ccgctgttccccgagggcttctacaacgaagtgctcgtgatcgcgcaggtcctttcctac
gacggcgagaatgagcccgatatggtcgcgatgtgcgccgcttcggccgcgctgaccatc
agcggcgttcccttcatgggcccgatcggcgccgcccgcgtcggctacatcgacggcgaa
tatatcctcaatccgacccaggagcaggtgaagaccggcgagctcgacctcgtcgtcgcc
gccaccggcaatgccgtgatgatggtcgaatccgaagccaaagagctgtcggaagaggtc
atgctcggcgccgtcgtattcgcacacgaagcctcgaagaaggtcgtcaatgcgatctgc
gacctcgccgaaaaggccgccaaggacccgtgggacctgaagcaggccgacgacaaggcc
gccaccaaggccaagctcaaggagctgatcggcgccgacatcgcggcggcctacaaggtt
accgccaagggcgagcgttcggacctcatcaatgccgcccgcgccaaggccaaggaagcc
ttcgccgacgccgagccgcaggagcagctcgtcgccgccaagctcgtcaaggtgctggaa
gcggacatcgtccgcaccgccatcctcgaggaaggccgccgcatcgacggccgcaacacc
accactgtccgtccgatcgaggcgatggttggcttcctgccgcgtacccatggttcggcg
ctgttcactcgcggcgaaacgcaggcgatctgcaccaccacgctgggcaccaaggacgcc
gagcagatgatcgacggtctggagggcctctcctaccagcgcttcatgctgcactataac
ttcccgccctactcggtcggcgaagtcggccgcttcggtgcgccgggccgccgcgaagtc
ggtcacggcaagctcgcctggcgcgcgcttcacccggtgctcccgacgacggaggagttc
ccgtacaccatccgcgtcctcagcgacatcaccgagagcaacggctcctcgtcgatggcc
accgtctgcggcggttcgctgtcgatgatggacgccggcgttccgctggcgcgtccggtc
gcgggcatcgccatgggcctcatcctcgagggtgagaagttcgcggtgatcagcgacatc
ctcggcgacgaagatcacctcggcgacatggacttcaaggtcgccggcaccgaccagggc
atcaccacgatgcagatggacatcaaggtcgccggtatcaccaaggagatcatgcaggtc
gccctggcccaggccaaggaaggccgcgcgcacatcctcggcgaaatggccaaggcgctc
gacagcacgcgcggcgagctttcggctcacgccccgcgcatcgagaccatgcagatcccc
aaggacaagatccgcgaagtgatcggcactggcggcaaggtgatccgcgagatcgtcgcc
accaccggcgctaaggtcgacatcgacgacgagggcctgatcaagatcagctcgtccgac
gtgacgcagatcgaagccgcccgtcagtggatccagggcatcacccaggagccggagccc
ggcaccatctacaccggcaaggtcgccagcatcgtcgatttcggcgcgttcgtgaccttc
atgcccggcaaggatggcctggtgcacgtgtcggaaatcaagaacgagcgcgtcgagaat
gtccgcgacatcctgaccgaaggccaggaagtgaaggtcaagctgctcgaggtcgacaac
cgcggcaaggtccgcctgtcgatgcgcgtcgtcgaccaggaaaccggcgccgagctggag
gacacccgtcccccgcgcgagccgcgtgaaggcggcgaccgtggtccgcgcggcgatcgt
ggcccccgtgagggtggccgtggtggcgatcgtcaccgcgagggccgtggcccgcgtcgt
gacggcggcgatcgtggcggccgtgatggcggcagcgaccgtggtccgcgcggcgaaggt
cgtggcggcgaaggtcggggcgatcgcggcccgcgccgtgaaggcggccgcgacgacaac
ggccccgcgcccgagttcgctccggccttcctgaccggcggcaacaacaacgacgactaa
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