Sphingomonas glaciei: M1K48_00620
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Entry
M1K48_00620 CDS
T08593
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
sglc
Sphingomonas glaciei
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sglc03021
]
M1K48_00620 (nusA)
03009 Ribosome biogenesis [BR:
sglc03009
]
M1K48_00620 (nusA)
Transcription machinery [BR:
sglc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
M1K48_00620 (nusA)
Ribosome biogenesis [BR:
sglc03009
]
Prokaryotic type
rRNA transcription factors
M1K48_00620 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
KH_2
S1
KH_1
HHH_5
KH_NusA_C
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UUR08185
LinkDB
All DBs
Position
complement(138867..140516)
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AA seq
549 aa
AA seq
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MATAAPAAPTANRAELLAIADSVAREKLIDRAIVIEAMEDAIQRAARARYGQENDIRAKL
DPQSGDLRLWRVVEVVEEAPEDYYKQIDLKGAQKLKADAAVGDFIVDPLPPIEFGRIAAQ
AAKQVIFQKVRDAERERQYEEFKDRTGEIITGVVKRVEFGHVVVDLGRAEGVIRRDAQIP
REMHRVGDRVRSLILRVARETRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARD
PGSRAKIGVISYDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSEDTATFVVNALQ
PATVARVVIDEEEGRIEVVVPDDQLSLAIGRRGQNVRLASQLTSSQIDILTEADASEKRQ
KEFVERSEMFQTELDVDETLAQLLVAEGFTSLEEVAYVEADEIASIEGLDDDIATELQER
ASEALERREAASREERRGLGVEDALAELPHLTEQMLVTLGKAKILTLDDLADLATDELVQ
KKRPEPRRRAENAPQRTEDKGGILAEYGLSEEQGNEIIMAARAHWFEDEASDDGAEPASE
EAVDADTSQ
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccgctcccgccgccccgacggccaaccgggccgagctgctcgccatcgcc
gacagcgtcgcgcgcgagaagctgatcgatcgcgccatcgtcatcgaggcgatggaagat
gcgatccagcgcgccgcccgcgcccgttacggccaggaaaacgatatccgcgccaagctc
gacccgcagtcgggcgacctgcgcctgtggcgggtcgtcgaagtggtcgaggaagcgccg
gaagattattacaagcagatcgacctcaagggcgcgcagaagctcaaggccgatgccgcg
gtcggcgacttcatcgtcgatcccctgcccccgatcgaattcggccgcatcgccgcccag
gccgccaagcaggtcatcttccagaaggtccgcgacgccgagcgcgagcgccagtatgag
gaattcaaggaccgcaccggcgagatcatcaccggcgtcgtcaagcgggtcgaattcggc
cacgtggtggtcgaccttggccgcgccgagggcgtgatccgccgcgacgcccaaatcccg
cgcgaaatgcaccgcgtcggcgaccgcgtccgctcgctgatcctgcgcgtcgcccgcgaa
acgcgcgggccgcagattttcctgtcccgcgcgcaccccgacttcatgaagaagctgttc
gcgcaggaagtgccggaaatctacgacggcatcatcgagatcaaagccgccgcccgcgat
ccggggagccgcgccaagatcggcgtcatcagctacgacagctcgatcgatccggtcggc
gcctgcgtcggcatgaagggcagccgcgtgcaggcagtcgtgcaggagatgcagggcgag
aagatcgacatcatcccctggtcggaagacaccgcgaccttcgtggtgaacgccctccag
ccggcgaccgtcgcccgggtcgtcatcgacgaggaagaaggccggatcgaggtggtggtc
cccgacgaccagctgagcctggcgatcggccgccgcggccagaacgtccgcttggccagc
cagctgaccagcagccagatcgacatcctgaccgaggccgacgcttccgaaaagcgccag
aaggaattcgtcgagcgctccgagatgttccagaccgagctggacgtcgatgagacgctg
gcccagctgctggtcgccgaaggcttcaccagcctcgaggaagtggcttacgtcgaggcc
gacgaaatcgcctcgatcgaaggtctcgacgacgacatcgccaccgagctccaggagcgt
gcctccgaagcgctggagcgccgcgaggccgcctcgcgtgaagagcgccgcggtcttggc
gtcgaggacgcgctggccgagctgccgcacctcaccgagcagatgctggtgacgctgggc
aaggccaagatcctgaccctcgacgaccttgccgacctggcgaccgacgaactggtccag
aaaaagcgccccgaaccccgccgccgcgccgagaatgcgccgcagcggaccgaggacaag
ggcgggatcctggccgaatatggcctgtccgaagagcaaggcaacgagatcatcatggcc
gcccgcgcccactggttcgaggatgaagcctcggacgacggcgccgaacctgcaagcgag
gaggccgttgatgcggacacctcgcaatga
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