Sphingomonas glaciei: M1K48_02120
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Entry
M1K48_02120 CDS
T08593
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc00550
Peptidoglycan biosynthesis
sglc01100
Metabolic pathways
sglc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
M1K48_02120 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M1K48_02120 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sglc01011
]
M1K48_02120 (mrdA)
Enzymes [BR:
sglc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
M1K48_02120 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sglc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
M1K48_02120 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UUR08465
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All DBs
Position
complement(473737..475725)
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AA seq
662 aa
AA seq
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MSRFTNAQADLVFSRRMLLLGGAQIGVAGALIGRMGWLSIKENERYNLLSEDNRVQLIIV
PPRRGWIVDRGGKPIAINRSDFRVDLIPERMDDPERELALLARLLALGPDQVDRITREVR
AAKGFQPVQVAENVPYDRYAAITVRLPELPGIEPARGFTRFYPAGAAVGQLIGYVGAANA
REYEREKNPLLITPGFKIGKEGLEAVLEQRLRGIPGGQRVEVSARGKLIRELTPKPDRSG
NTVQLSIDAGLQEYAARRLGEESGSCTILDCETGDLLCMASMPSYDPNSFSDGIGRTEWK
TLSEDPRKPLVNKTVNALYPPGSTLKPMAALAIQQAGIDPKERVFCGGGYQLGNRFFRCL
GRHGTVDMHRAIAKSCNTYFYTMANRIGYDAIAPMARLLGLGEKFDLPLVSQNYGTIPDS
EWKRRRFERNKRLVERPDWTRSDSLNAVIGQGFVIVNPLQLAVQAACIASGRNIRPLLLG
KHDQPAAPLDIPAEHLAAVRGGMWEVVNGDGTAGASRLQVRGIEMCGKTGTAQVRRLSAS
ASRGQGGDWRYRDHGLFVFFAPFDKPRYAGSVVIEHGMGGARAAAPVAKDVLTYLFDRPQ
ALKRLEGLEAEWGGTLAERMARRSAAIEAAAAQAAAARSAPIAAPSPIPPSVNLPPPAPE
DR
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
gtgagccggttcaccaacgctcaggccgaccttgtcttctcgcgccggatgctgctgctg
ggcggggcccagatcggtgtcgccggcgcgctgatcggccgcatgggctggctctccatc
aaggaaaacgaacgctacaatttgctgtccgaggacaaccgggtccagcttatcatcgtc
cctccgcggcggggctggatcgtcgaccgcgggggcaagccgatcgccatcaaccggtcc
gacttccgggtcgacctcatccccgagcggatggacgatccggagcgcgaactggcgctg
ctcgcccgtctgctagcccttggtcccgaccaggtcgatcgcatcacccgcgaagttcgc
gccgcgaaaggcttccagccggtgcaggtggccgagaacgtgccctatgatcgctatgcc
gcgatcaccgtccgcctgcccgagctgccagggatcgagccggcccgcggcttcacccgc
ttctaccccgcgggcgcggcggtcgggcagctgatcggctatgtcggcgcggccaacgcc
cgcgaatatgagcgggagaagaaccccctgctgatcacgccgggattcaagatcggcaag
gagggactggaagccgtcctcgagcagcggctgcgcggtattccgggcggccagcgggtt
gaggtctccgcccgcggcaagctgatccgtgagctaacccccaagcccgaccgctcgggc
aacaccgtacagctgtcgatcgatgccggcctgcaggaatatgccgcccgccggctgggc
gaggaaagcggcagctgcaccatcctcgactgcgagaccggcgacctcctctgcatggcc
tccatgccgagctacgatcccaacagcttctccgacgggatcggtcggaccgagtggaag
accctgtccgaagacccgcgcaagccgctcgtcaacaagacggtgaacgccctctatccg
ccgggctccacgctcaagccgatggccgcactggcgatccagcaggccggtatcgacccc
aaggaacgggtattctgcggcggcggctatcagctcggcaatcgcttcttccgctgcctc
ggtcggcacggcacggtcgacatgcaccgcgccatcgccaagagctgcaacacctatttc
tacaccatggccaaccgcatcggctacgacgcgatcgcgccgatggctcggctgctcggc
ctcggcgaaaagttcgacctgcccctggtcagccagaattacggcaccatccccgacagc
gaatggaagcgccgccgcttcgagcgcaacaagcggctggtggagcggcccgactggact
cgatcggacagcctcaacgcggtgatcggtcagggcttcgtgatcgtgaacccgttacag
ctggcggttcaggctgcctgcatcgccagcggacgcaacatccgcccgctgctgctcggc
aagcatgaccagccggccgcgccgctcgacattccggccgagcatctggcggcggttcgc
ggcgggatgtgggaggtggtcaacggagatggcaccgcgggcgcttcgcggcttcaggtg
cggggaatcgagatgtgcggcaagaccggcaccgcccaggtccgtcgcctgtcggccagc
gcaagccgcggccagggcggcgactggcgctaccgcgaccacggcctgttcgtgttcttc
gcgcccttcgacaagccgcgctatgcgggctcggtggtgatcgagcatggcatgggaggg
gctcgcgccgccgctccggtcgccaaggatgtgctgacttatctgttcgaccggccgcag
gcgctcaaacgcctcgaagggctggaagccgaatggggcggcaccctggccgagcggatg
gcgcgtcgctccgccgcgatcgaggcggccgccgcccaggccgccgccgcccgttcagcc
cccattgcggcgccctcgcccatcccgcccagcgtcaacctgcccccgccggcgcccgag
gaccgctga
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