Sphingomonas glaciei: M1K48_02710
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Entry
M1K48_02710 CDS
T08593
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc00300
Lysine biosynthesis
sglc00470
D-Amino acid metabolism
sglc01100
Metabolic pathways
sglc01110
Biosynthesis of secondary metabolites
sglc01120
Microbial metabolism in diverse environments
sglc01230
Biosynthesis of amino acids
Module
sglc_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
M1K48_02710 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
M1K48_02710 (dapF)
Enzymes [BR:
sglc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
M1K48_02710 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UUR08570
UniProt:
A0ABY5MVU1
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All DBs
Position
complement(592389..593180)
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AA seq
263 aa
AA seq
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MLRQFHKMHGLGNDFVILDAREQPLEMTEALARHIADRREGIGCDQLILLEHSDRADLRM
RIFNADGSEVQSCGNATRCVVRLTGAATIETAGGLLSGASEGDAVEVTLVEPRFEWDAIP
LAYPLPTDPLPMGWENLDRPYAVNVGNPHLVFFVDDLEDADLEGIGPGIETDPLFPERIN
VNVASVGVNSIRLRTFERGAGLTRACGTGACATAIAAIRTRLASSPVNVHMAGGSLTIAW
APGEPVRMRGSATHVFKGFIDLP
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggcaattccacaagatgcacggcctcggaaacgacttcgtcattctcgacgcg
cgcgaacagccgctggagatgaccgaggcgcttgcccggcacatcgccgaccgccgcgag
gggatcggctgcgaccagttgatcctgctcgaacacagcgaccgcgccgacctcaggatg
cggatcttcaacgccgacggcagcgaagtgcaaagctgcggcaatgccacccgctgcgtg
gtcaggctgaccggcgcggcgacgatcgagaccgccggcggcctgctcagcggcgcgagc
gaaggcgacgcggtcgaggtcaccctggtcgagccccgcttcgagtgggatgccatcccc
ctcgcctacccgctgccgaccgaccccctgccgatgggatgggagaatctcgatcggccc
tatgccgtcaacgtcggcaacccgcacctcgtcttcttcgtcgatgatttggaggacgcc
gacctcgaaggcatcggtcccggcatcgagaccgacccgttgtttcccgagcggatcaac
gtcaatgtcgcaagcgtgggcgtgaatagcatccgcctccgcaccttcgaacgcggcgcc
ggcctgacccgagcctgcgggaccggggcctgcgccaccgcaatcgccgcgatccggacg
cgccttgcctcctcgccggtgaacgtccacatggcgggcggcagcctcaccattgcctgg
gcccccggcgagccggtgcgcatgcgcggctccgccacccacgtcttcaagggctttatc
gacctcccatga
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