Sphingomonas glaciei: M1K48_02735
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Entry
M1K48_02735 CDS
T08593
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sglc
Sphingomonas glaciei
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sglc03032
]
M1K48_02735
03036 Chromosome and associated proteins [BR:
sglc03036
]
M1K48_02735
03400 DNA repair and recombination proteins [BR:
sglc03400
]
M1K48_02735
DNA replication proteins [BR:
sglc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
M1K48_02735
Chromosome and associated proteins [BR:
sglc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
M1K48_02735
DNA repair and recombination proteins [BR:
sglc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
M1K48_02735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-DNA_bdg
2C_adapt
Motif
Other DBs
NCBI-ProteinID:
UUR08575
LinkDB
All DBs
Position
597046..597318
Genome browser
AA seq
90 aa
AA seq
DB search
MNKQDLIGQVADRAGLNRMDAARAVETMLEVITDALSRGDEVRLVGFGNFVVTRRKASVG
RNPRTGEPLQIDSTAQPKFRAGKLLKEAVQ
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatctgatcgggcaggtcgccgatcgcgcgggcctcaaccggatggac
gccgcccgcgccgtggaaaccatgctcgaggtgatcaccgatgccctcagccgcggcgat
gaagtgcggctggtaggcttcggaaatttcgtggtgacccggcgcaaggcctctgtcggg
cgcaatccgcgtaccggcgagccgcttcagatcgacagcacggcgcagcccaagttccgc
gccggcaagcttctcaaggaagcggtacagtaa
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integrated database retrieval system
