Sphingomonas glaciei: M1K48_02920
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Entry
M1K48_02920 CDS
T08593
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc00061
Fatty acid biosynthesis
sglc00071
Fatty acid degradation
sglc01100
Metabolic pathways
sglc01212
Fatty acid metabolism
sglc02024
Quorum sensing
sglc04146
Peroxisome
Module
sglc_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
M1K48_02920
00071 Fatty acid degradation
M1K48_02920
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
M1K48_02920
09145 Cellular community - prokaryotes
02024 Quorum sensing
M1K48_02920
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sglc01004
]
M1K48_02920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sglc04147
]
M1K48_02920
Enzymes [BR:
sglc01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
M1K48_02920
Lipid biosynthesis proteins [BR:
sglc01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
M1K48_02920
Exosome [BR:
sglc04147
]
Exosomal proteins
Exosomal proteins of breast milk
M1K48_02920
Exosomal proteins of breast cancer cells
M1K48_02920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
UUR08607
LinkDB
All DBs
Position
complement(626272..627948)
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AA seq
558 aa
AA seq
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MNITGSNSGHPVAPDWRPEALPVAELLVRSARQHPDRIALDFMGRTWRYDALLEGARAAA
AGFQRIGVRPGTRVGLFLPNTPHYPIAYHGALLAGATVVNFSPLYSPDEVAFQARDSGTE
VMVCLDLKRLWAPMQRLLDKGMLRNLVVGSLVDVLPPLRSLGFRLLKRGERQDLPQYERV
VRWSTFLRSPAELKPVEVDPRSIALLQYTGGTTGVPKGAALTHANLTANAQQLAAIDPGE
GERTARVLAALPLFHIFANSAVLNRSLMSGGTLYLLARFDAGEALAVIRRGRMTDLCGVP
AMFQAMIDHPDVARTNFDSVQQCFSGGAAMTAVLKERFERTTGARVLEGYGLTETSGVVA
VNPFVGETRAGTVGLPLPATEIRITDPENPDRVLAGGETGELQIKGPQVMVGYWQAAVEA
PDPLPGGWLRTGDLGFVESGGYLRLVDRSKDMINVGGFKVFPSQVEAALLKHAAVKECLV
IAVPDERVGERPKAFAVLNEGAEASPTDLMTALCERIGKHERPVAIEILDDLPRTMIGKP
DRKALTKMDAERRAAATS
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
ttgaacatcaccggcagcaattcaggacatccggtcgcccccgactggagacccgaagcc
ttgccggtggcggaattgctggtgcgcagtgcgcggcagcatccagaccgcatcgcgctc
gacttcatggggcgcacctggcgctacgacgccttactggagggtgcccgtgcggccgcc
gcgggattccagcggatcggggtcagaccaggcacgcgggttgggctgttcctacccaat
acgccgcattacccgatcgcttatcatggcgcgctgctcgccggcgcgacggtggtcaac
ttctcgccgctctattcgcctgacgaggtcgccttccaggcccgtgactcagggaccgaa
gtgatggtctgtctcgacctcaagcgcttgtgggcgccgatgcagcgactgctggacaag
ggcatgctgcgaaacctcgtggtcgggtcgctggtcgatgtgttgccgccgcttagaagc
cttggcttccgcttgctcaagcgcggcgaacgtcaggacctgccgcagtacgagcgggtc
gttcgctggagcacattcctccgatctccggcggagctcaagccggtcgaggtcgacccc
cgatcgattgcgctgcttcaatataccggaggcacgaccggcgtccccaagggcgcggcg
ctcacccacgccaacctgaccgccaacgcccagcagctagccgcgatcgaccccggtgag
ggcgaacgcaccgcacgggtgctcgccgcgcttcccttgttccacatcttcgccaacagc
gctgtcctgaaccgctccctgatgtccggcggcaccttgtatctgctcgcccggttcgac
gcgggcgaggcgctggccgttattcgccgcgggcggatgaccgacctgtgcggcgtgccc
gcgatgttccaggcgatgatcgaccatcccgacgtcgccaggacgaacttcgattccgtc
cagcagtgcttctcggggggcgcggcgatgaccgctgtgctcaaggagcggttcgagcgc
accaccggcgcccgcgtgctcgaaggctatggcctgaccgagaccagcggggtggtcgcg
gtcaatccgttcgtcggcgagacccgcgccggtactgtcggcctgccgcttcccgcgacg
gagataaggatcaccgacccggagaatcccgaccgggtgttggcaggcggggagacgggc
gaactccagatcaagggaccgcaggtgatggtcggctattggcaggctgccgtcgaggca
cccgatccgcttcccggcggctggctccgcaccggcgatctcggcttcgtcgaatccggc
ggctacctccgcttggttgatcgctccaaggacatgatcaatgtcggcggcttcaaggtc
ttcccgagccaggtcgaggccgccctgctgaagcatgcggcggtcaaggagtgcctggtc
attgccgtcccggacgagcgggtgggcgagcggccaaaggcctttgcggtgctcaacgaa
ggcgctgaggcctcgccgacggacctgatgacggcgctgtgcgagcggatcggcaagcat
gagcggcccgtcgcgatcgagatcctcgacgatctgccgcgcaccatgatcggcaagccc
gatcgcaaggcgctgacgaagatggatgcggagcgccgcgcggccgctaccagctag
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