Sphingomonas glaciei: M1K48_05820
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Entry
M1K48_05820 CDS
T08593
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
sglc
Sphingomonas glaciei
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sglc03009
]
M1K48_05820 (rimO)
Enzymes [BR:
sglc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
M1K48_05820 (rimO)
Ribosome biogenesis [BR:
sglc03009
]
Prokaryotic type
ribosomal protein modification factors
M1K48_05820 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
TRAM
Motif
Other DBs
NCBI-ProteinID:
UUR09132
LinkDB
All DBs
Position
1195378..1196763
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AA seq
461 aa
AA seq
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MATVLPTPPRVGMVSLGCPKNLVDSERILGQLRSDGYQMSADYQGADVVLVNTCGFLDSA
KEESLEAIGEALAENGRVIVTGCMGREAEVIRARFPNVLAITGAHAYEDVVAAVHDAAPA
PRSPYLDLVPQATPNLKLTPRHYSYLKISEGCNHRCAFCIIPQIRGDLVSRRPDAILREA
EKLLAQGTRELLVISQDTSAYGLDLKHAAWPWKGGDVRAHMTDLARALGELRAPDGTRPW
VRLHYVYPYPHVDRIMPLMAEGLVLPYLDIPFQHASPKVLKAMRRPANEARVLERLVQWR
REVPDIAIRSSFVVGFPGETEEDFDYLLQWLAEARLDRVGAFRFEPVEGAPANDLPGHVS
PEVKEERYARVMELTARISADKLAAKVGQSIDIIIDAVDPETGGATGRSKADAPEIDGEV
HLRDAGHLVPGDFATVLVEEADEHDLFGVPVQEQANEAARG
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagtacttcccaccccgccgcgcgtcggcatggtcagtctcggctgtcccaag
aacctcgtcgacagcgagcggatcctcggtcagctgcgctcggacggctatcagatgagc
gccgactatcagggcgccgacgtcgtcctggtcaacacctgcggctttctcgactctgcc
aaggaagaaagcctcgaagcgatcggcgaagcgctggccgagaacggccgcgtcatcgtc
accggttgcatgggccgcgaggccgaggtcatccgtgcccgcttcccgaacgtcctcgcg
atcaccggtgcccacgcctacgaggacgtcgtcgccgcggtgcatgacgccgcccccgcg
cctcgctcgccctatctcgacctcgtcccgcaggcgacgcccaacctcaagctgacgccg
cggcactacagctatctgaagatctccgagggctgcaatcaccgctgcgccttctgcatc
atcccgcagatccgcggcgacctcgtctcgcgccgcccggacgccatcctgcgcgaggcc
gagaagctgctcgcccaaggtacccgtgagttgctggtgatcagccaggacaccagcgcc
tacggcctcgacctcaagcacgccgcctggccgtggaagggcggcgacgttcgcgcccac
atgaccgacctcgcccgtgcgctgggtgagcttcgcgcccccgacggcacccggccgtgg
gtccgcctgcactacgtctacccttacccccacgtcgaccggatcatgccgctgatggcc
gaagggctggtcctcccctacctcgatatccccttccagcacgcgagccccaaggtgctg
aaggcgatgcgccgtccggcgaacgaggcccgcgtccttgagcggctggtccagtggcgc
cgcgaagtccccgatatcgccatccgctcctccttcgtggtcggcttccccggcgagact
gaggaggacttcgactacctcctccaatggctggccgaagcccgcctcgaccgcgtcggc
gccttccgcttcgagcctgtcgagggcgcccccgccaatgatctgcccggccacgtgtcg
cccgaggtcaaggaagagcgctacgcccgagtgatggagctcaccgcccgcatctcggcc
gataagcttgccgccaaggtcggacaaagcatcgacatcatcatcgatgcggtcgacccc
gaaaccggcggcgccaccggccgcagcaaggccgacgcgcccgagatcgacggcgaggtc
cacctgcgcgatgccggccatctcgtccccggcgactttgccaccgtgctggtcgaggaa
gccgacgaacatgacctgttcggcgtccccgtacaggagcaggcgaatgaggcggctcga
ggataa
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