Sphingomonas glaciei: M1K48_08530
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Entry
M1K48_08530 CDS
T08593
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M1K48_08530 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sglc03400
]
M1K48_08530 (ruvB)
Enzymes [BR:
sglc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M1K48_08530 (ruvB)
DNA repair and recombination proteins [BR:
sglc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M1K48_08530 (ruvB)
RecFOR pathway proteins
M1K48_08530 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
AAA_3
AAA_16
Sigma54_activat
AAA_22
AAA_2
AAA_14
Bac_DnaA
AAA_18
nSTAND3
AAA_17
TsaE
Rad17
RNA_helicase
AAA_28
AAA_25
NTPase_1
NB-ARC
AAA_33
DUF815
ABC_tran
AAA_24
NACHT
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
UUR06999
LinkDB
All DBs
Position
1749022..1750047
Genome browser
AA seq
341 aa
AA seq
DB search
MATDPDRITTPERTAEDVDAALRPKRLDEFVGQQAARENLRVFIAAAKARGEALDHVLFF
GPPGLGKTTLAQIVAREMGVGFRATSGPVIAKSGDLAALLTNLEDGDVLFIDEIHRLNPA
VEEVLYPAMEDRALDLVIGEGPSARSVRIDLPRFTLVGATTRQGLLTTPLRDRFGIPVRL
NFYTVPELELVVRRAASLLGAPVTEDGAHEIARRSRGTPRIAGRLLRRVRDFAHAAGADS
IDMAAADRALSRLEIDALGLDAMDRRYLHMIADLYGGGPVGVETLAAGLSEPRDTIEDVI
EPYLIQLGLIARTARGRCLNGKAWTHLGLMPPSGTPNGLFD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgatcccgaccgcatcaccacgcccgagcgtacggccgaggacgtcgacgcg
gcgcttcgtcccaagcggctcgacgaattcgtcggccagcaggccgcgcgcgaaaatctg
cgcgtgtttatcgctgccgccaaagcccgcggcgaggcgctcgaccatgtgctgttcttc
gggccgcccgggctcggcaagaccaccctggcgcagatcgtcgcgcgcgagatgggggtc
ggcttccgcgccacctcgggcccggtgatcgccaagtcgggcgatctcgccgcgttgctg
accaacctcgaggacggcgacgtcctgttcatcgacgagatccaccgcctcaatccggcg
gtcgaggaagtgctctatccggcgatggaggaccgcgcgctcgacctcgtcatcggcgaa
ggtccctcggcgcgctcggtgcggatcgacctgccgcgtttcaccctggtcggggcgacc
acccggcaggggctgctgacgaccccgctgcgcgaccgcttcgggatcccggtgcgcttg
aacttctacaccgtgcccgagctcgaactggtggtccgccgcgccgccagcctgctcggc
gcgccggtcaccgaggatggcgcgcacgagatcgcccgccgcagccgcggcaccccgcgc
atcgcggggcgactgctacgccgggtccgcgacttcgcgcatgccgccggggcggacagc
atcgacatggcggccgccgaccgcgcgctgagccgcttggagatcgacgcgcttgggctc
gacgcgatggaccgccgctacctccacatgatcgccgacctctacggcggcgggccggtc
ggggtggagaccctcgccgcgggcctcagcgagccgcgcgacacgattgaggacgtgatc
gaaccctacctcattcagctcggcctcatcgcccgcaccgcacgcggacgttgcctgaac
ggcaaggcctggacccaccttggcctgatgccgccttcaggcaccccgaacggacttttc
gactag
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