Sphingomonas glaciei: M1K48_09935
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Entry
M1K48_09935 CDS
T08593
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc03030
DNA replication
sglc03410
Base excision repair
sglc03420
Nucleotide excision repair
sglc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M1K48_09935 (polA)
03410 Base excision repair
M1K48_09935 (polA)
03420 Nucleotide excision repair
M1K48_09935 (polA)
03440 Homologous recombination
M1K48_09935 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sglc03032
]
M1K48_09935 (polA)
03400 DNA repair and recombination proteins [BR:
sglc03400
]
M1K48_09935 (polA)
Enzymes [BR:
sglc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M1K48_09935 (polA)
DNA replication proteins [BR:
sglc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
M1K48_09935 (polA)
DNA repair and recombination proteins [BR:
sglc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
M1K48_09935 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M1K48_09935 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
DprA_N
HAMP_N3
HHH_5
HHH_2
HHH
DNA_pol_lambd_f
Motif
Other DBs
NCBI-ProteinID:
UUR07260
LinkDB
All DBs
Position
complement(2043052..2045832)
Genome browser
AA seq
926 aa
AA seq
DB search
MPDAQPHLYLVDGSSYIFRAYHRLPPLTNRHGMNVGAVYGYTAMLWKLAESLSKADGPTH
MAVILDKGSSSFRNEMYDQYKAHRPPAPEDLVPQLPLIRVATRAFSIPCIEEAGLEADDI
IACYVTEAKKNGWMTTIVSSDKDLMQLIEDGSVDMLDTMNDRRFDRAAVVEKFGVPPEQL
GDVLALMGDSVDNVPGVPGVGPKTASQLIQEHGSLEAVLAAADGIKKPKLRQNLIEHAES
ARLSRELVRLVCEMNLPEPLDALELKNIPEEPLRDFLVDQGFKTLLNRMVGQGARPSNGE
RPAPAPLPAGPGEAEAISVDRSTYLTISDAATLEQWLAEAREQGKVAIDLQGDGGHGLAE
GLAGVSLALAPGRAAYVPLGHGGGDLLSEGPAQIGLTAGLELLKPLLEDSSVLKIGHNLK
DQLRLLADLGITVAAGEDVMLGSFALDSGRFGHGLDELVKRHFEHACLPLKAVCGTGQKT
IRFGDAPIAAATEYAAENADMVWRLWHRIEHRLAAENSTRVYRLVDLPLVPVIGQMEREG
IKVDRAYLAELSETFATETVRLEEVIYEAAGGPFTIGSPQQLGSVLYDRLGLKGGRKGKS
GAYSTDQAELERLEAEGVEVARRVLEWRQLTKLRVTYTDALQTQIDPRTGRVHTRYALAA
AQTGRLSSNDPNLQNIPIRTEIGARIRNAFIAEEGHSLLSADYGQIELRLAAHMADVPQL
KEAFARGDDVHTITAREVFGDEGKESRNKAKTINFAILYGISAFGLAGRMGIGRDEAKDM
IDRYFERFPGIKSYISTTLQQVRECGFSQTLFGRKTHFPNIRSGVMNLRQGAERAAINAP
IQGTSADIIKRAMVKMPAALAAAGLSGTRMLLSVHDELVFEVPHGDEERAAAVIRDVMAA
AGEPVVTLDVPLSVEVGWGANWGVAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgcccagccccatctctatctcgtcgacggatcgagctacatcttccgcgcc
tatcaccggctgccgccgctgaccaaccgccacgggatgaacgtcggcgcggtctacggc
tacaccgcgatgctttggaagctcgccgagagcctgtccaaggccgacgggccgacccac
atggcggtgatcctcgacaaggggtcctcctcgttccgcaacgagatgtacgaccagtat
aaggcgcaccgcccgcccgcgcccgaggaccttgtcccgcaactgccgctgatccgcgtt
gcgacccgggctttctcgattccctgcatcgaggaagcggggctggaggccgacgacatc
atcgcctgctacgtcaccgaggcgaagaagaacgggtggatgacgaccatcgtcagttcc
gacaaggatctgatgcagctgatcgaggacggcagtgtcgacatgctcgacaccatgaac
gaccgccgcttcgaccgtgcggcagtggtcgagaagttcggcgtgccgcccgagcagctg
ggcgacgtgctggcgctgatgggcgacagcgtcgacaatgttcccggcgtcccgggtgtc
gggccgaagaccgccagccaattgatccaggagcatggcagcctggaagcggtgctggcc
gcggccgacgggatcaagaagcccaagctgcgccagaacctgatcgagcatgccgaatcg
gcccgcctcagccgtgagctggtgcggttggtgtgcgagatgaacctgcccgagccgctc
gacgcgcttgagctcaagaacattcccgaagagccactgcgcgacttcctggtcgaccag
ggcttcaagaccctgctcaaccggatggttggacagggcgcgcggccgtcgaatggcgaa
cggccggccccggcgccgctgccggccggccctggcgaagcggaagcgatcagcgtcgat
cgttcgacctatttgaccatctccgacgccgcgacgctggagcagtggcttgccgaagcc
cgcgagcagggcaaggtcgcaatcgacctgcagggcgatggcggtcatggcctggccgag
gggctggccggggtcagcctcgcgctggcgccgggccgcgcggcctatgtcccgctcggg
cacggcggcggcgacctgctgagcgagggcccggctcagatcggcttgacggcaggcctg
gagttgttgaagccgctgctggaggattcgtcggtcctcaagatcggccacaacctcaag
gatcagctgcgcctgctggccgatctcggcatcaccgtcgccgcgggagaggacgtcatg
ctgggcagcttcgcgctcgacagcgggcgcttcggccacggcctcgacgaattggtgaag
cggcatttcgagcatgcttgcctgcctctgaaagccgtctgcgggaccgggcagaagacc
atccgcttcggcgacgcgccgatcgccgccgcgaccgaatatgccgccgagaatgccgac
atggtgtggcggctgtggcaccggatcgagcatcgcctggcggcggagaattcgacccgg
gtctaccgcctggtcgacctgccgctggtcccggtgatcgggcagatggagcgcgagggg
atcaaggtcgaccgcgcttatcttgccgaactgtcggagaccttcgcgaccgagacagtg
cggctggaagaggtgatctacgaggccgccggcggtcccttcaccatcgggtcgccgcag
cagctcggctcggtgctgtacgaccgcctgggattgaagggcggacgcaagggcaagtcg
ggcgcctattctaccgaccaggccgagctcgagcggctcgaggccgagggggtggaggtc
gcccgccgcgttctcgaatggcgtcagctgaccaagctcagggtcacctataccgacgcg
ctgcagacccagatcgatccgcgcaccggccgggtccacacccgctatgcgctggccgcg
gcgcagaccgggcggctgtcgtcgaacgatcccaatctgcagaacatcccgatccggacc
gagatcggggcgcgcatccgcaacgcctttatcgccgaggagggccacagcctgctgtcg
gccgactatggccagatcgagctgcgcctggccgcgcacatggcggacgtgccgcagctg
aaggaggcctttgcgcggggcgacgacgtccacaccattaccgcacgcgaagtgttcggc
gacgaaggcaaggaaagccgcaacaaggctaagacgatcaacttcgccatcctctacggc
atctccgccttcggcctcgccggccggatggggatcggccgggacgaggccaaggacatg
atcgaccgctatttcgagcgtttcccgggcatcaaaagctatatctcgaccactctccag
caggttcgcgaatgcgggttcagccagaccctgttcgggcgcaagacgcatttccccaac
atccgctccggggtgatgaacctgcgccagggagccgagcgggcggcgatcaacgcgccg
atccagggcaccagcgccgacatcatcaagcgcgcgatggtcaagatgccggccgcgctc
gcggctgccgggctgagcggcacccggatgctgctgtcggtgcacgacgaactcgtgttc
gaagtgcctcatggcgacgaggagcgtgcggcggcggtgatccgtgacgtcatggccgcg
gctggtgagccggtggtcacgctcgacgtgccgctcagcgtcgaagtgggctggggcgcc
aactggggcgtcgcgcattga
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