Sphingomonas glaciei: M1K48_10205
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Entry
M1K48_10205 CDS
T08593
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M1K48_10205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sglc03400
]
M1K48_10205
Enzymes [BR:
sglc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
M1K48_10205
DNA repair and recombination proteins [BR:
sglc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
M1K48_10205
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
UUR07312
UniProt:
A0ABY5MTB2
LinkDB
All DBs
Position
complement(2091004..2091795)
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AA seq
263 aa
AA seq
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MSKLKIASWNINSVRARVPIVGRFLDEEQPDILCLQETKAEDKVFPAELFTSRGYVHHAL
NGQRMHHGVAILSRVPLEDPGRHDWQDNGEARHVGARLPNGLRLENVYVPAGGDIPDRTL
NPKFGQKLDFIERMTRWSEGLDEPTLIVGDFNVAPLECDVWSHKALRDVVSHTEVEIEAL
ARLQAAHDWVDLGRKFVPAPERCFTWWSYRSPDWTKNDRGRRLDHMWASPSVAAQATMHK
VHEPCRAWERPSDHVPLVVELSL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaaactcaagatcgccagctggaacatcaacagcgttcgcgcccgcgtgcccatc
gtcggccgctttctcgacgaggagcagcccgacatcctgtgcctccaggagaccaaggcc
gaggacaaggttttcccggccgagctgttcacctcgcgcggctatgtccatcacgccctg
aacggccagcgcatgcatcatggcgtcgccatcctcagccgcgtgccgctggaagatcct
ggccgccacgactggcaggacaatggcgaggcgcggcatgtcggagcgcgcctgccgaac
gggcttcggctcgagaatgtctacgtgcccgcgggcggcgatattcccgaccgcacgctc
aatcccaagttcggccagaagctcgacttcatcgagcggatgacccgctggtcggagggc
ctcgacgagcccacgctcatcgtcggcgatttcaacgtcgcgccgctcgagtgcgacgtg
tggagccacaaggcgctgcgcgacgtggtcagccacaccgaggtcgagatcgaggcgctg
gcgaggctgcaggcggcgcacgactgggtcgacctcggtcgcaagttcgtgcccgcaccc
gagcgttgcttcacctggtggagctatcgttcgcccgactggacgaagaacgatcgtggc
cgccggcttgaccatatgtgggcctcgcccagcgtcgccgcacaggcgaccatgcacaag
gtgcacgagccatgccgcgcgtgggagcgcccgtccgatcacgtgccgctggtggtcgag
ctctcgctttga
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