Sphingomonas glaciei: M1K48_10640
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Entry
M1K48_10640 CDS
T08593
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
M1K48_10640 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sglc03021
]
M1K48_10640 (rpoZ)
03400 DNA repair and recombination proteins [BR:
sglc03400
]
M1K48_10640 (rpoZ)
Enzymes [BR:
sglc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
M1K48_10640 (rpoZ)
Transcription machinery [BR:
sglc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
M1K48_10640 (rpoZ)
DNA repair and recombination proteins [BR:
sglc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
M1K48_10640 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
APG6_N
Chp1_domII
Motif
Other DBs
NCBI-ProteinID:
UUR07394
LinkDB
All DBs
Position
complement(2178305..2178646)
Genome browser
AA seq
113 aa
AA seq
DB search
MARVTVEDCVDKVSNRFDLVLLAAQRARQISGGADLTIDRDRDKNPVVALREIAEETVRP
KELNESLISSLQRVQIDEEDATDELASLSESAEALRLTAAAPPRPTPSGGDYE
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgtcaccgtcgaagattgcgtcgacaaggtctcgaaccgctttgatctcgtc
ctgcttgcggcccagcgcgcgcggcagatttcgggcggcgccgatctcaccattgatcgt
gaccgcgacaagaatccggtcgtcgccctgcgcgagatcgccgaggaaaccgttcgcccg
aaggagctgaacgaatcgctgatttccagcctgcagcgcgtccagatcgacgaggaggat
gccactgacgagctggcctcgctcagcgaatcggccgaggcgcttcgcctcaccgccgcc
gcgccgccgcgtccgaccccttcgggcggcgattacgaataa
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