Sphingomonas glaciei: M1K48_10660
Help
Entry
M1K48_10660 CDS
T08593
Name
(GenBank) CDC48 family AAA ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sglc
Sphingomonas glaciei
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
M1K48_10660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sglc03019
]
M1K48_10660
03009 Ribosome biogenesis [BR:
sglc03009
]
M1K48_10660
04131 Membrane trafficking [BR:
sglc04131
]
M1K48_10660
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sglc04147
]
M1K48_10660
Messenger RNA biogenesis [BR:
sglc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
M1K48_10660
Ribosome biogenesis [BR:
sglc03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
M1K48_10660
Membrane trafficking [BR:
sglc04131
]
SNARE
SNARE associated proteins
Others
M1K48_10660
Autophagy
Aggrephagy
Other aggrephagy associated proteins
M1K48_10660
Exosome [BR:
sglc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M1K48_10660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_14
TIP49
IstB_IS21
AAA_3
NPHP3_N
nSTAND3
AAA_28
Vps4_C
AAA_18
Zeta_toxin
AAA_7
RNA_helicase
Mg_chelatase
AAA_24
Sigma54_activat
AAA_30
AAA_17
DUF815
AAA_11
ABC_tran
AAA_lid_PRS2_C
TsaE
AAA_19
ATPase
Parvo_NS1
NB-ARC
bpMoxR
MazE_antitoxin
MCM
CPT
Motif
Other DBs
NCBI-ProteinID:
UUR07398
LinkDB
All DBs
Position
complement(2182011..2184311)
Genome browser
AA seq
766 aa
AA seq
DB search
MADVETRIRRLQVANLPPADSGRGIARVPRSIMDQLGLSDGDVIEIEGKRTTPALAVRPY
GDDEGLDIIRLDGLQRANAGVGAGDFVEVRVAQSKPATRVVFAPAQNNIRLQGSSEALKR
SFAGRPLTSGDTIATAGHQRVNADMPDHVRQLLNAPAFALQEIRLSVVSTTPRGIVHIDA
STVVELLSEYTEQHGERRADVTYDDLGGMRSTIDALREMVELPLRHPELFQRLGVDPPKG
VLLHGPPGTGKTRLARAVANESDAQFFHIAGPEIMGSAYGESEKKLRELFEEAGQAAPSI
IFIDEIDSIAPKRSQVTGEAEKRLVAQLLTLMDGLEPRQNLVVIAATNRPDAIDEALRRP
GRFDREIVVGVPDETGRREILGIHTRGMPLDEGVDLDGLSRRTYGFVGADLAALTREAAL
EAVRRIMPELNLADGTIPTEVLDRLSVLASDFDNALKRVQPSAMREVMVQVPTVGWDDVG
GLDAAAEKLKEGIELPLKHADAFKRLGIRPAKGFLLYGPPGTGKTLLAKAAARESQANFI
AIKSSDLLSKWYGESEQQISRLFARARQVAPTVIFIDELDSLVPARGGGMGEPQVTERVV
NTILAEMDGLEELQGVVLIGATNRPNLIDPALLRPGRLDELVYVGPPDVAGRRRILAIHA
KRMPLAADVDLEDLARRTERFTGADLEDLTRRAGLTALRRDLANTEVSMADFDEALKETR
ASVTPEMLTEYERIADTLKSDAVRPDRGGIGFITPGMLTPREGGKS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtggaaacccgaattcgccgcctgcaggtggccaacctgccccccgccgac
agcggccgcgggatcgcgcgggtgccgcgctcgatcatggatcagcttggcctgtccgac
ggcgacgtgatcgaaatcgagggcaagcgcactacgccggcgctggcggtgcggccttat
ggcgacgacgaaggcctcgacatcatccgcctcgacgggctccagcgcgccaatgcgggg
gtcggcgccggcgatttcgtcgaggtgcgcgtcgcccagtccaagcccgcgacccgggtg
gtgttcgccccggcccagaacaacatccgcctccagggttcatccgaagcgctgaagcgc
agcttcgccgggcgtccgctgacgagcggcgacaccatcgccaccgccggccaccagcgg
gtcaatgccgacatgcccgaccatgtccggcaattgctcaatgcgccggcgttcgcgctg
caggaaatccgcctcagcgtggtcagcactaccccgcgcgggatcgtccacatcgacgcg
agcaccgttgtcgaactgttgtccgaatataccgagcagcatggcgagcgccgcgccgac
gtcacctacgacgaccttggcggcatgcggtccaccatcgacgcgctgcgcgaaatggtc
gagcttccgctgcgccatcccgaactgttccagcggctcggcgtcgatccgcccaagggc
gttctgctgcacggcccccccggcaccggcaagacccggctggcgcgtgcggtcgccaac
gaaagcgacgcgcaattcttccacatcgccggtcccgagatcatgggctcggcctatggc
gaatccgagaagaagctgcgcgagctgttcgaggaagcgggccaggccgcgccgtcgatc
atcttcatcgacgagatcgactcgattgcgcccaagcgcagccaggtcaccggcgaagcg
gagaagcgcctcgtcgcccagctgctgacgctgatggacgggctcgaaccgcgccagaac
ctggtcgtgatcgccgccaccaaccgccccgacgcgatcgacgaagcgcttcgccgcccg
ggccggttcgaccgcgagatcgtggtcggtgtgcccgacgagaccggccgccgcgagatc
ctcggcatccacacccgcggcatgccgctcgacgaaggcgtcgacctcgatggcctgtcg
cggcgcacctacggcttcgtcggcgccgaccttgccgctttgacccgcgaggccgcgctc
gaagcggtgcggcggatcatgcccgagctgaaccttgccgacgggacgatcccgaccgaa
gtgctcgaccggctgagcgtgctcgccagcgatttcgacaatgcgctgaagcgggtccag
ccctctgcgatgcgcgaggtgatggtgcaggtcccgacggtcgggtgggacgatgtcggc
ggcctcgacgccgccgcggagaagctgaaggaaggaatcgagcttccactcaagcatgcc
gacgcgttcaagcggctcggcatccgtccggccaagggcttcctgctctatggcccgccc
ggcaccggcaagaccctgctggccaaggctgcggcgcgcgaaagccaggccaatttcatc
gccatcaagtcgtccgacctcttgagcaaatggtatggcgaaagcgagcagcagatcagc
cgcctgttcgcccgcgcccgccaggtcgcgccgacggtgatcttcatcgacgagttagac
agcctggtccccgcgcggggcggcggaatgggcgagccgcaggtgaccgagcgggtggtc
aacaccatccttgccgagatggacgggctggaggaactgcagggcgtggtgctgatcggc
gccaccaaccgccccaacctgatcgaccctgccctgctgcgtccgggccggctcgacgaa
ctggtctatgtcggcccgcccgacgtcgccggccgccgccggatcctggcgatccatgcc
aagcgcatgccgcttgccgccgacgtcgatctcgaggacctcgcccgccggaccgagcgc
ttcaccggcgccgacctcgaggatttgacccgccgcgccggcctcaccgcgcttcgccgc
gatctcgccaataccgaggtcagcatggccgacttcgacgaggcgctgaaggaaacccgg
gcctcggtcacgcccgagatgctgaccgaatatgagcgcatcgcggacacgctgaagagc
gatgcggtgcgccccgatcgcggcgggatcggcttcatcacccccggcatgctgactccg
cgggagggcggcaagagctag
DBGET
integrated database retrieval system
