Sphingomonas glaciei: M1K48_14295
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Entry
M1K48_14295 CDS
T08593
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sglc
Sphingomonas glaciei
Pathway
sglc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sglc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
M1K48_14295 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sglc03400
]
M1K48_14295 (mutM)
Enzymes [BR:
sglc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
M1K48_14295 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
M1K48_14295 (mutM)
DNA repair and recombination proteins [BR:
sglc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
M1K48_14295 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Tautomerase
Motif
Other DBs
NCBI-ProteinID:
UUR08071
LinkDB
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Position
2878697..2879503
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AA seq
268 aa
AA seq
DB search
MPELPEVETTVRGLAKVLEGRRLSRVEARRADLRRAFPEDLGQRLTGARVTRLGRRAKYG
LVHTDRGDTMVFHLGMSGRWRIDPAADEPHDHLALETDEGHRLVLNDPRRFGSVDLVPTE
GLAEWGPFKALGPEPFDLTAEELQRRLKGRSAAIKLMLLDQRIVAGLGNIYVCEALFRAG
INPRRAAGKVSLERLRRLVPAVHEVLAEAIEAGGSSLRDYARPDGELGYFSKSFSVYDRE
GEPCPCGGTVKRFAQGGRSTWYCPACQR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagcttcccgaagtcgagaccaccgtgcgcggcctggcgaaagtgctggagggc
cggcggctgagccgcgtcgaggcacggcgggcggacctgcggagggcgtttccggaggac
cttggacagcggctgacgggggcgcgggtgacgcgcctcggacggcgggccaaatatggg
ctggtccataccgaccgcggcgacacgatggtgttccaccttggcatgagcgggcggtgg
cggatcgatccggcggcggacgagccgcacgaccatctggcgctggagaccgacgagggg
caccggctggtgttgaacgatccccgccggttcggcagcgtcgacctcgtgccgaccgag
gggctggcggaatgggggccgttcaaggcgctcggccccgagccgttcgacctcaccgcc
gaggagttgcagcggcggctgaaggggcggagcgcggcgatcaagctgatgctgctcgac
cagcggatcgtcgcggggcttggcaacatctacgtctgcgaggcgctgttccgggccggg
atcaaccccaggcgggcggcgggcaaggtcagcctcgagcgattgcggcggctcgtgccg
gcggtccacgaggtgctggccgaggcgatcgaggcgggcggatcgagcctgcgcgactat
gcccggcccgatggcgagctgggttatttcagcaagagcttctcggtctacgaccgcgag
ggcgagccatgtccatgcggcgggacagtcaagcgcttcgcgcagggcgggcggtcgacc
tggtattgccccgcctgccagcgctga
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