Streptomyces glycanivorans: P8A20_07875
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Entry
P8A20_07875 CDS
T10510
Name
(GenBank) AlkA N-terminal domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sgly Streptomyces glycanivorans
Pathway
sgly03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P8A20_07875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sgly03000
]
P8A20_07875
03400 DNA repair and recombination proteins [BR:
sgly03400
]
P8A20_07875
Enzymes [BR:
sgly01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
P8A20_07875
Transcription factors [BR:
sgly03000
]
Prokaryotic type
Helix-turn-helix
AraC family
P8A20_07875
DNA repair and recombination proteins [BR:
sgly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P8A20_07875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HhH-GPD
HTH_AraC
DUF6233
HHH
Motif
Other DBs
NCBI-ProteinID:
WLQ63508
LinkDB
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Position
complement(1831584..1833071)
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AA seq
495 aa
AA seq
DB search
MTSEDSRYEAVSSRDARFDGEFFFAVSTTGIYCRPSCPATTPKRRNVTFFPTAAAAQGNG
FRACRRCRPDAVPGSADWNARADLVGRAMRLIGDGVVDREGVAGLAARLGYSARQIQRQL
NAEVGAGPIALARAQRAHTARVLLQTTTLGAAEIAFAAGFASVRQFNDTVREIYALTPGE
LRAARPGGSSRYGCVGTADGGGGVPLRLAHRGPYAAAAIFDHLAARALTGIEEVAGERGD
RTYRRTLRLPNGAGIAEVGERTGDGWLECRLHLGDLRDLTTATQRMRRLFDLDADPDAVA
ERLGTDPALAPLVARSPGLRAPGTADVHELAVRAVLGRQVSVAAGRRLGSALVTAYGQPL
KVPSGALTRTFPDLGDLAEAGLDELGMPGSRRATLRAVAAALADGRIGLDPGADRDLAEK
DLLGLPGVGPWTAGYIRMRALGDPDVLLTGDVAVRAGMRQAGAEAADTGTWRPWRTYAMH
HFWRAAADRRRPAPA
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcgaggacagcaggtacgaggcggtgagcagccgcgacgcccggttcgacggc
gagttcttcttcgccgtgtccacgaccgggatctactgccgcccgagctgtccggccacc
acgccgaagcgccggaacgtgacgttcttccccaccgcggccgcggcccagggcaacgga
ttccgtgcctgcaggcgctgccgccccgacgccgtgcccggctccgccgactggaacgcg
cgcgccgacctggtgggccgggccatgcggctgatcggcgacggggtcgtcgaccgcgaa
ggggtggccgggctcgctgcacgcctcggctacagcgcccgccagatccagcgccagctg
aacgccgaggtcggcgccggacccatcgccctcgcccgcgcccagcgggcccacaccgcc
agggtcctgctccagaccaccaccctgggagcagccgagatcgctttcgccgccggtttc
gccagcgtgcggcagttcaacgacacggtgcgcgagatctacgccctcacccccggagag
ctgcgcgccgcccggcccggcggctcctcccgctacggctgcgtcggcaccgccgacgga
ggcggcggagtgcccctgcggctcgcccaccggggcccctacgccgctgccgcgatcttc
gaccacctcgcggcacgcgccctcaccggcatcgaggaagtcgcgggtgagcgcggcgac
cgcacctaccggcgcaccctgcgtctgccgaacggcgccgggatcgccgaggtcggggag
cggaccggcgacggctggctggagtgccggctgcacctcggggacctgcgcgacctgacg
accgcgacccagcggatgcgccgcctcttcgacctggacgccgatccggacgcggtcgcc
gagcgcctcggcacggaccccgcactcgccccgctcgtcgcccggtcgccggggctgcgg
gcccccggtaccgccgatgtccacgaactggccgtccgggcggtactgggccggcaggtc
tccgtggccgccggacgccggctcggcagcgcgctggtgacggcctacggacagccgctc
aaggttcccagcggcgccctcacccgtacgttccccgacctcggggacctagccgaggcc
ggcctggacgagctcgggatgcccggctcccggcgcgccaccctgcgcgccgtcgcggcc
gcgctggccgacgggaggatcggcctggacccgggcgccgaccgggacctggccgagaag
gacctcctgggcctgccgggtgtcggcccctggaccgccggatacatccgcatgcgggca
ctcggcgaccccgacgtactgcttaccggcgatgtggccgtccgggcggggatgcggcag
gcgggggccgaggccgcggacaccgggacctggcgcccctggcgcacgtacgccatgcac
cacttctggagggctgccgcggaccggcgccgtcccgcgccggcgtga
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