Streptomyces glycanivorans: P8A20_08245
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Entry
P8A20_08245 CDS
T10510
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sgly Streptomyces glycanivorans
Pathway
sgly00040
Pentose and glucuronate interconversions
sgly01100
Metabolic pathways
sgly02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
P8A20_08245
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
P8A20_08245
Enzymes [BR:
sgly01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
P8A20_08245
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
F5_F8_type_C
VasI
nec1
Motif
Other DBs
NCBI-ProteinID:
WLQ63578
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Position
complement(1913701..1915254)
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AA seq
517 aa
AA seq
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MRRPVALRLNAALATLAVAAATGVVLSMPEAASAAATGSATGYATQNGGTTGGAGGTTVR
ATTGTAIHTALCNRASSSTPITIEVEGTINHGNTTKVSGSSCNTAAGVIELKQISNVTLV
GVGSGAVFDQLGIHIRESSNIIIQNVTVKNVKKSGSPTSNGGDAIGMESDVRNVWVDHTT
LEASGGESEGYDGLFDMKDNTQYVTLSYSTLRNSGRGGLVGSSETELSNGYITYHHNLYE
NIDSRAPLLRGGIAHIYNNYYVKLNESGINSRAGARAKVDNNYFKDSKDVLGTFYTDAAG
YWQVSGNTFDNVTWSAKGSENNPAGPDPKSNTTVSIPYSYSLDNASCVPAIVGATAGANK
GLKVSDGSCSPTTPTPTPTPTPTDPTPDPTDPTQPGGTNLSIGAGSDGSSKASGSSYGNV
RDGDMSTYWSPAGSTGSISIKWGTATSVSKVNIREASGSTGVIGAWRVVNGDTGAVLTSG
TGAGTITVPKTSLKKVTFEITGSSGTPKVAEFETYAG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaccagtcgcgctgcgactcaacgccgctctggccacgctggccgtggcggcc
gcgaccggcgtggtgctgtcgatgcccgaggcggcgtcggcggcggcgaccgggagtgcc
accggatacgcgacccagaacggcgggaccaccggcggcgccggcgggacgaccgtgcgg
gccaccacgggtaccgcgatccacacggccctgtgcaaccgggccagcagcagcaccccg
atcaccatcgaggtcgagggcacgatcaaccacggcaacaccaccaaggtgtcggggagc
agctgcaacaccgccgccggtgtgatcgagctcaagcagatcagcaacgtcacgctcgtc
ggcgtcggcagcggtgccgtcttcgaccagctgggcatccacatccgtgagtccagcaac
atcatcatccagaacgtgaccgtcaagaacgtcaagaagtccggctcgcccacgtccaac
ggcggtgacgccatcggcatggagagcgacgtccgcaacgtctgggtcgaccacacgact
ctggaggcctcgggcggtgagtcggagggctacgacggcctcttcgacatgaaggacaac
acccagtacgtcacgctgtcctacagcaccctgcgcaactccggccgtggcggcctggtc
ggctccagcgagaccgagctctcgaacggctacatcacctaccaccacaacctgtacgag
aacatcgactcgagggcgcccctgctgcgcggcggcatcgcccacatctacaacaactac
tacgtgaagctcaacgagtccggaatcaactcccgggccggagcgcgggccaaggtcgac
aacaactacttcaaggactccaaggacgtcctgggcacgttctacacggacgcggccgga
tactggcaggtcagcggcaacacgttcgacaacgtgacctggtccgccaagggcagcgag
aacaacccggccggtcccgacccgaagtccaacaccacggtcagcatcccctactcctac
agcctggacaacgcgagctgcgtcccggcgatcgtgggtgcgaccgcgggcgccaacaag
ggcctgaaggtgtcggacggcagctgctcgccgacgacccccacccccacccccaccccc
acgcccaccgacccgacaccggacccgacggaccccacccagcccggcggcaccaacctg
agcatcggtgccggatccgacggctccagcaaggcgagcgggtccagctacggcaacgtg
cgtgacggtgacatgagcacctactggtcgccggccggctcgacgggttccatctcgatc
aagtgggggaccgccacctccgtgtcgaaggtgaacatccgtgaggcgtcgggttccacc
ggggtcatcggagcctggagggtcgtcaacggtgacaccggcgcggttctcacctccggg
accggggccggcaccatcaccgtccccaagacctcgctgaagaaggtcaccttcgagatc
accggctcgtccgggacaccgaaggtcgccgagttcgagacgtacgccggatag
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