Streptomyces glycanivorans: P8A20_09055
Help
Entry
P8A20_09055 CDS
T10510
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgly Streptomyces glycanivorans
Pathway
sgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A20_09055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgly03019
]
P8A20_09055
03400 DNA repair and recombination proteins [BR:
sgly03400
]
P8A20_09055
Enzymes [BR:
sgly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P8A20_09055
Messenger RNA biogenesis [BR:
sgly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
P8A20_09055
DNA repair and recombination proteins [BR:
sgly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
P8A20_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Pribosyltran
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WLQ63731
LinkDB
All DBs
Position
2158398..2160569
Genome browser
AA seq
723 aa
AA seq
DB search
MTNADRAELRASADSVLARLVGDTTGTARLREDQWRAIEALVADRRRALVVQRTGWGKSA
VYFVATSLLRAQGSGPTVIVSPLLALMRNQVAAAARAGISARTINSSNTEEWDTVQAEVA
AGEVDVLLVSPERLNNPDFRDQVLPRLAAATGLLVVDEAHCISDWGHDFRPDYRRLRTML
ADLPAGVPVLATTATANARVTADVAEQLGTGAGTDALVLRGPLDRESLSLGVLQLSDAAH
RLAWLGDHLGELPGSGIIYTLTVAAAEEITAYLRQCGHPVASYTGRTENADRQQAEDDLL
ANRVKALVATSALGMGFDKPDLGFVVHVGSPSSPIAYYQQVGRAGRGVEHAEVLLLPGKE
DEAIWQYFASVAFPPEEQVRRTLDVLAQAGRPLSLPAMEPLVDLRRTRLETMLKVLDVDG
AVKRVKGGWISTGEPWVYDAERYAWVARQRASEQQSMRDYASTTGCRMEFLRLQLDDDEA
TACGRCDNCAGARFDDKVSTAALDGARGELGRPGVEVEPRKMWPTGLSSVGIDLKGRIPA
GELAHPGRALGRLSDIGWGNRLRPLLTAQTQDTSVPDDVSSAVVTVIADWAKGPGGWASG
APDAAPRPVGVVTLASRRRPRLVHSLGSRIAEVGRMPLLGTVTYAPGCEDLRISQTNSAQ
RVKTLHETLVVEPALAEALTAAGGPVLLVDDLSDTGWTLAVAARLLRRAGAEGVFPLVLA
VQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacgcagaccgcgcagagctcagggcctcggccgattccgtactcgcccgcctg
gtcggggacaccaccggcaccgcccggctgcgcgaggaccagtggcgggccatcgaggcc
ctcgtcgccgacaggcgcagagccctggtcgtccagcggacgggatggggcaagtccgcg
gtgtatttcgtggccacgtcactgctgcgcgcgcagggaagcggaccgacggtgatcgtc
tcccccctgcttgctctgatgcgtaaccaggtggcggcggcggcaagggccggtatcagc
gcccgcacgatcaactcctccaacaccgaggaatgggacacggtccaggcagaggtggcg
gccggtgaggtggacgtcctgctggtcagcccggagcggctcaacaaccccgacttccgc
gaccaggtgctgccccgcctggccgctgcgacggggctgctggtggtggacgaggcgcac
tgcatctccgactggggccatgacttccgcccggactaccggagacttcggaccatgctc
gccgatcttcccgcgggcgtccccgtcctagcaacgacggccaccgccaacgcccgtgtg
accgcggacgtcgcggagcagctcggcacgggagcgggcaccgacgccctggtgctgcgg
ggccctctggaccgggagagcctcagtctcggcgtgctgcaactgagcgacgcggcacat
cgtcttgcctggttgggtgaccatctcggggaactgccgggctccggcatcatctacacg
ctgaccgtcgcggccgccgaggagatcaccgcctacctccgccagtgcgggcatccggtc
gcctcgtacaccggcaggacggagaacgccgaccggcaacaggccgaggacgatctcctg
gccaaccgggtcaaggccctggtggccacgtccgcgctcggcatgggtttcgacaagccg
gacctcggattcgtcgtgcacgtgggatcgccgtcctctcccatcgcttactaccagcaa
gtcggacgcgccggccgcggtgtcgagcacgccgaggttctgctgctcccgggcaaggag
gacgaagccatctggcagtacttcgcctcggtcgcgttccctccggaggagcaggtgcgc
cggactctcgatgtgctcgcccaggctggccgccccttgtcgctccccgccatggaaccg
ctggtcgacctgcggcgcacccgcctggagacgatgctcaaggtgctggacgtcgacggt
gcggtgaaacgggtcaagggcggctggatctccacgggtgaaccatgggtctacgacgcg
gaacgctatgcctgggtcgcacggcagcgggcctccgagcagcagtccatgcgcgactac
gcgtcgacgaccggatgccgcatggagttcctgcggctccagttggacgacgacgaggcc
accgcctgcggacgctgtgacaactgcgccggcgcgcgcttcgacgacaaggtctccacg
gccgctctcgacggggctcgcggtgagctgggcaggcccggggtggaggttgagccgcgc
aagatgtggcccacggggctctcatcggtgggtatcgatctcaagggccgcatcccggcc
ggcgagctggcccatccgggccgggccctgggcaggctctcggacatcggctggggcaac
aggctccgtccgctgctcacggcacagacacaggacacttcggtccccgacgacgtgtcg
agcgcggtggtcacggtgatcgcggactgggcgaaggggcccggcggctgggcatcgggg
gctccggacgccgctccccgaccggtcggtgtcgtcacgctcgcctcacgccggagaccg
cggttggtccactcactcggcagccgtatcgccgaggtcggacggatgcctctgctcggt
acggtcacctacgctccgggctgcgaggacctccggatctcgcagaccaacagcgcacag
cgggtcaagacgctgcacgagaccctcgtcgtggagcccgcactggcggaggctctcact
gccgcaggggggcccgtcctgctcgtggacgacctctccgacaccggctggacgctggcc
gtcgcggcaaggctgctccgacgtgcgggagcggagggggtgtttccgctggtcctcgcg
gtccaggcctga
DBGET
integrated database retrieval system
