Streptomyces glycanivorans: P8A20_09400
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Entry
P8A20_09400 CDS
T10510
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
sgly Streptomyces glycanivorans
Pathway
sgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A20_09400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgly03019
]
P8A20_09400
Messenger RNA biogenesis [BR:
sgly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
P8A20_09400
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WLQ63794
UniProt:
A0ABY9JBK8
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Position
complement(2246698..2248383)
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AA seq
561 aa
AA seq
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MSHPHPELGTPPKLPKGGLRVTPLGGLGEIGRNMTVFEYGGRLLIVDCGVLFPEEEQPGI
DLILPDFTTIRDRLDDVEGIVLTHGHEDHIGAVPYLLRLKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVTEGQRERIGIFDCEFVAVNHSIPDALAVAIRTPAGMAVVTGDFKMDQLP
LDGRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRTVFANAQKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPAGLVVDVKTLDDLPD
DEVVLVCTGSQGEPMAALSRMANRDHQIRIVPGDTVILASSLIPGNENAVYRVINGLTRW
GANVVHKGNAKVHVSGHASAGELLYFYNICKPKNLMPVHGEWRHLRANAELGALTGVPKD
HIVIAEDGVVVDLVDGKAKIVGKVQAGYVYVDGLSVGDVTETSLKDRRILGDEGIISVFI
VVDSSSGKIVGGPHIQARGSGIDDGAFTAVVPKVEDALNKSAQDGVMEPHQLQQLVRRTV
GKWVSDTYRRRPMILPVVVEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
ttgagtcatccacatcctgaactcggtaccccgccgaagctcccgaagggcggtctgcgg
gtcacgccgctgggcggcctcggcgagatcggccgcaacatgacggtcttcgagtacggc
ggccgcctgctcatcgtcgactgcggtgtgctcttccccgaggaggagcagccgggcatc
gacctgatcctgccggacttcaccacgatccgggaccgcctggacgacgtcgagggcatc
gtcctcacgcacggccacgaggaccacatcggtgccgtcccgtatctgctccggctgaag
ccggacatccccctcatcggctccaagctgaccctcgcactcatcgaggccaagctccag
gagcaccggatccgtccctacaccctcgaggtgaccgagggacagcgtgagcgcatcggg
atcttcgactgcgagttcgtcgcggtcaaccactccatcccggacgccctcgcggtcgcc
atccgcacccctgcgggcatggctgtcgtgaccggtgacttcaagatggaccagctcccg
ctggacggccgtctcaccgacctgcacgcgttcgcccggctgagcgaggagggcatcgac
ctccttctctccgactcgacgaacgccgaggtccccggattcgttccgccggagcgggac
atctccaacgtcctgcgcacggtgttcgccaacgcgcagaagcgcatcatcgtggcgagc
ttcgccagccacgtgcaccgcatccagcagatcctggacgccgcccacgagtacggccgc
agggtcgcgttcgtcggacgctccatggtccgcaacatgggtatcgcgcgtgacctgggc
tatctcaaggtgcccgcaggtctggtggtcgacgtcaagaccctcgacgacctgccggac
gacgaggtcgtcctggtctgcacgggttcccagggtgagccgatggcagccctctcccgt
atggccaaccgggaccaccagatccggatcgtcccgggcgacacggtgatcctggcgtcg
tccctgatccccggcaacgagaacgcggtctaccgcgtgatcaacggcctgacccgctgg
ggcgcgaacgtcgtccacaagggcaacgccaaggtccacgtctcgggtcacgcctcggcc
ggcgaactgctgtacttctacaacatctgcaagccgaagaacctgatgccggtccacggc
gaatggcgccacctccgggccaacgccgaactcggtgcgctgaccggcgtgccgaaggac
cacatcgtcatcgccgaggacggcgtcgtcgtcgacctcgtcgacggcaaggcgaagatc
gtcggcaaggtccaggccggctacgtgtacgtcgacggcctctcggtcggcgatgtcacc
gagacctccctcaaggaccgccgcatcctcggcgacgaggggatcatctcggtcttcatc
gtggtggacagctcgtccggcaagatcgtgggcggcccgcacatccaggcccgcggttcc
ggcatcgacgacggtgcgttcaccgccgtggtacccaaggtcgaggacgcgctcaacaag
tccgcccaggacggggtgatggagccgcaccagctccagcagctggtccggcgcacggtg
ggcaagtgggtgtccgacacctaccgccggcgtccgatgatccttccggtcgtcgtcgag
gtctga
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