Streptomyces glycanivorans: P8A20_11430
Help
Entry
P8A20_11430 CDS
T10510
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sgly Streptomyces glycanivorans
Pathway
sgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A20_11430 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgly03021
]
P8A20_11430 (rho)
03019 Messenger RNA biogenesis [BR:
sgly03019
]
P8A20_11430 (rho)
Transcription machinery [BR:
sgly03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P8A20_11430 (rho)
Messenger RNA biogenesis [BR:
sgly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P8A20_11430 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WLQ64164
UniProt:
A0ABY9JBE8
LinkDB
All DBs
Position
complement(2711846..2713915)
Genome browser
AA seq
689 aa
AA seq
DB search
MSDTTDLMGVTADKNVDSSVPAEGAASGTTARRRRSGTGLEGMVLAELQQVASGLGIRGT
ARMRKSQLIEVIKEAQAGGSSAPASKAAASAGTDAGSKPKRRATSKSRTGEEAAAAPAAD
KAAAQQQIDIPGQPASDDQPTGERRRRRATAQAGSPDKAESKAEAASEPKSEPKGEGRQD
RADERGEAKADAKAETATDNAEGRRGDRQDGRRGDRQDRGDRGDRGDRRDRQRDRRGKGD
DQGQQSGGRRQGQQGGGQSQGQGQQGGGGQQDDGFDDEGGRRGRRGRYRDRRGRRGRDDF
ATDVQVADDDVLIPVAGILDILDNYAFIRTSGYLPGPNDVYVSLAQVRKNGLRKGDHVTG
AVRQPKDGERREKFNALVRLDSVNGMAPESGRGRPEFQKLTPLYPQDRLRLETDSNVLTT
RIIDLVAPIGKGQRGLIVAPPKTGKTMILQAIANAITVNSPECHLMVVLVDERPEEVTDM
QRSVKGEVISSTFDRPAEDHTTVAELAIERAKRLVELGHDVVVLLDSITRLGRAYNLAAP
ASGRILSGGVDSTALYPPKRFFGAARNIEDGGSLTILATALVETGSRMDEVIFEEFKGTG
NMELKLDRKLSDKRIFPAVDVDASSTRKEEILLGTDELAVTWKLRRVLHALDQQQAIELL
LDRMKKTQSNAEFLLQIQKTTPGNGGGND
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacaccaccgatctgatgggcgtgactgccgacaagaacgtcgacagctccgtg
cccgccgaaggtgctgcctctggcaccaccgcacggcgccgccgctccggcaccggcctc
gagggcatggtcctggccgagctgcagcaggtcgcgtccggcctcggtatcaggggaacc
gcgcgcatgcgcaagagccagctgatcgaggtcatcaaggaggcgcaggccggaggatcc
tccgcgcccgcctccaaggccgccgcgtccgccggtacggacgccgggagcaagccgaag
cggcgtgccacgtccaagtcgcgcaccggtgaggaagccgctgccgcgcccgccgccgac
aaggccgccgcgcagcagcagatcgacatcccgggccagccggccagtgacgaccagccg
acgggcgagcgccgccggcgccgcgcgaccgcgcaggcgggcagcccggacaaggccgag
tccaaggcggaggccgcgtccgagccgaagtccgagccgaagggcgagggccgccaggac
cgcgcggacgagcgcggcgaggcgaaggccgacgcgaaggccgaaaccgccacggacaac
gccgagggccgtcggggcgaccgccaggacggccgccgcggcgaccgtcaggaccgtggt
gaccgcggtgaccgcggtgaccgccgggaccgccagcgtgaccgccggggcaagggcgac
gaccagggccagcagagcggtggacgccgtcagggccagcagggcggcggccagagccag
ggccagggccagcagggcggcggcggccagcaggacgacggtttcgacgacgagggcggc
cgtcgcggccgtcgcggccgttaccgcgaccgccgtggccgtcgcggccgcgacgacttc
gcgaccgacgtccaggtggccgacgacgatgtcctgatccccgtcgcgggcatcctcgac
atcctcgacaactacgcgttcatccggacctccggctacctgccgggcccgaacgacgtg
tacgtctcgctcgcccaggtccgtaagaacggcctgcgcaagggtgaccacgtcacgggt
gccgtgcgccagcccaaggacggcgagcgccgcgagaagttcaacgcgctggtccgcctc
gactcggtcaacggcatggcgccggagtccggccgcggccgccccgagttccagaagctg
accccgctgtacccgcaggaccggctccgtctggagaccgactccaacgtcctgaccacc
cggatcatcgacctggtcgcaccgatcggcaagggccagcgtggcctgatcgtggccccg
ccgaagaccggtaagaccatgatcctgcaggccatcgccaacgcgatcacggtcaacagc
cccgagtgccacctgatggtcgtcctggtcgacgagcgtccggaagaggtcaccgacatg
cagcggtcggtgaagggcgaggtcatctcctcgaccttcgaccgtcccgccgaggaccac
accacggtcgccgagctcgccatcgagcgcgcgaagcgcctcgtggagctgggccacgac
gtcgtggtcctgctggactcgatcacccgtctgggccgtgcctacaacctggcggcgccg
gcctccggccgcatcctgtccggtggtgtcgactcgaccgcgctctacccgccgaagcgc
ttcttcggtgccgcgcgcaacatcgaggacggcggctcgctgaccatcctggccaccgcg
ctcgtcgagaccggctcgcgcatggacgaggtgatcttcgaggagttcaagggcaccggc
aacatggagctcaagctcgaccggaagctctcggacaagcgcatcttcccggcggtggac
gtcgacgcgtccagcacccgtaaggaagagatcctgctcggcaccgacgagctggccgtc
acctggaagctgcgccgtgtgctccacgcactcgaccagcagcaggccatcgagctgctc
ctggaccgcatgaagaagacgcagtccaacgcggagttcctgctgcagatccagaagacg
acgccgggcaacggcggcggcaacgactga
DBGET
integrated database retrieval system
