Streptomyces glycanivorans: P8A20_20305
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Entry
P8A20_20305 CDS
T10510
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
sgly Streptomyces glycanivorans
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgly03016
]
P8A20_20305
Enzymes [BR:
sgly01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
P8A20_20305
Transfer RNA biogenesis [BR:
sgly03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
P8A20_20305
Prokaryotic type
tRNA splicing ligases
P8A20_20305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
WLQ65785
UniProt:
A0ABY9JF69
LinkDB
All DBs
Position
4603778..4604971
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AA seq
397 aa
AA seq
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MSYVEVPGAKVPIRMWADPASVEDGAMQQLRNVSTLPWIKGLAVMPDVHFGKGATVGSVI
AMHGAVCPAAVGVDIGCGMSAVRTSLTANDLPGDLSRLRSKIEQAIPVGRGMHDSTVDPG
RLHGFPTTGWDDFWTRFDGIAEAVKFRRERATKQMGTLGSGNHFIEFCLDEAGSVWLMLH
SGSRNIGKELADFHIGQAQKLPHNQGLVDRDLAVFIADTPQMAAYRNDLFWAQEYAKYNR
SIMMGLFQDVVRKEFKKARVTFEPVISCHHNYVSEERYDGMDLLVTRKGAIRAGSGEFGI
IPGSMGTGSYIVKGLGNAKSFNSASHGAGRRMSRNAAKRRFSTQDLEDQTRGVECRKDSG
VVDEIPAAYKPIEQVIDQQRDLVEVVAKLKQLVCVKG
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgtagaggtaccgggtgcgaaggttcccatccgtatgtgggcggatccggcg
tccgtcgaggacggcgcgatgcagcagctgcggaacgtgtccacgctgccctggatcaag
ggtctggccgtcatgccggacgtccacttcggcaagggcgcgaccgtcggttctgtgatc
gcgatgcacggcgcggtctgcccggccgcggtgggcgtggacatcggctgcgggatgtcg
gcagtcaggacgtcgctcacggccaacgacctgccgggagacctctcgcggctccggtcg
aagatcgagcaggcgattcccgtgggccgggggatgcacgacagcacggtcgacccgggc
aggctccacggcttcccgaccaccggctgggacgacttctggacgcggttcgacgggatc
gccgaggcggtcaagttccggcgggaacgggccaccaagcagatggggacgctcgggagc
gggaaccacttcatcgagttctgcctcgacgaggcgggatcggtgtggctgatgctgcac
tccggttcccggaacatcggcaaggagctcgccgacttccacatcggccaggcccagaag
cttccgcacaaccagggactcgtcgaccgtgacctggccgtcttcatcgcggacaccccg
cagatggcggcgtaccgcaacgacctgttctgggcccaggagtacgccaagtacaaccgc
tcgatcatgatggggctcttccaggacgtggtccgcaaggagttcaagaaggcccgggtc
acgttcgagccggtcatctcctgccaccacaactacgtctccgaggagcggtacgacggc
atggacctgctggtcacccggaagggcgcgatccgcgccggctcgggggagttcggcatc
attcccggctccatggggaccggctcgtacatcgtgaagggcctggggaacgcgaagtcg
ttcaactccgcctcgcacggtgcgggccggcggatgagcaggaacgcggccaagcggagg
ttctcgacgcaggacctggaggaccagacgcggggtgtggagtgccgcaaggactccggc
gtggtggacgagatcccggcggcgtacaagccgatcgagcaggtcatcgatcagcagcgg
gatctggtcgaggtcgtcgcgaagctcaagcagctcgtgtgcgtgaagggctga
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