Streptomyces glycanivorans: P8A20_34790
Help
Entry
P8A20_34790 CDS
T10510
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
sgly Streptomyces glycanivorans
Pathway
sgly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
P8A20_34790 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgly03021
]
P8A20_34790 (rho)
03019 Messenger RNA biogenesis [BR:
sgly03019
]
P8A20_34790 (rho)
Transcription machinery [BR:
sgly03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
P8A20_34790 (rho)
Messenger RNA biogenesis [BR:
sgly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
P8A20_34790 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
AAA_25
AAA_22
AAA
DUF3086
ATPase_2
NACHT
Motif
Other DBs
NCBI-ProteinID:
WLQ68413
UniProt:
A0ABY9JP76
LinkDB
All DBs
Position
complement(7867056..7868195)
Genome browser
AA seq
379 aa
AA seq
DB search
MTSTLERPVTPQDQPVRTVGVLDTAAGGHGVLRVDGACPSSRDVQVTPALIRRYGLRRGD
LVEGTCERPRALSGVDAVNGRPSHTLRGRPHFRDLTPLHPRERLRLERPEGGPAPRIIDL
VSPVGKGQRGLIVAPPKTGKTVLLQQIAASVAVNHPECHLMVVLLDERPEEVTDMRRSVR
GEVYSSTFDRPPKEHVALADLAVERAKRLVEQGQDVVILLDSLTRLCRAHNNSAGAGGRT
LSGGVDAAALMGPKKLFGAARLAEEGGSLTILATALVDTGSRADDYFFEELKSTGNMELR
LDRALADRRVFPAVDITPSGTRREELLLPPAELAAVRGLRRALRTRDAQATLETLLDRIR
RTPDNAAFLQQVRHTVPDA
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcacactcgaacgccccgtgaccccacaggatcagcccgtccgcaccgtcggt
gtcctcgacaccgcggccggcggacacggcgtgctgcgcgtcgacggggcctgcccctcc
tcccgcgacgtccaggtgacgcccgcgctgatccggcggtacggcctgcgcagaggcgac
ctcgtcgaagggacctgtgagcgccctcgcgccctgtccggggtcgatgccgtcaacggc
cgcccctcgcacacgctccggggccggccgcacttccgtgatctcactcccctgcacccc
cgggagcggctgcgcctggagcgcccggagggcggtccggccccgcggatcatcgacctc
gtgtcaccggtggggaagggccagcgcgggctgatcgtcgcaccgccgaagaccgggaag
accgtactgctgcagcagatcgccgcatcggtcgccgtgaaccaccccgagtgccatctg
atggtggtgcttttggacgagcgccccgaagaggtgacggacatgcgccgttccgtgcgg
ggagaggtgtactcctccacgttcgaccggcctcccaaggagcacgtcgcgctcgcggat
ctcgccgtggaacgcgccaaacggctggtcgagcagggccaggacgtcgtcatcctgctc
gactccctgacccggctgtgccgcgcgcacaacaacagcgcaggcgccggcggacgtacg
ctgagcggcggcgtggacgcggcggcgctcatgggccccaagaagctgttcggggcggcc
cggctcgccgaggagggcggttcgctcaccatcctggcgaccgcactcgtggacaccggt
tcacgcgccgacgactacttcttcgaggagctcaagagcaccggcaacatggagctccgt
ctcgaccgggcgctggccgaccggcgcgtcttccccgcggtcgacatcacgccgtccggc
acccgccgcgaggaactcctgctgccgccggccgaactggccgccgtgcgcggcctgcgg
cgcgccctgcgcacgagggacgcccaggccacgctggagacgttgctggacaggatccgc
aggactcccgacaacgccgccttcctccagcaggtcaggcacaccgtgcccgacgcctga
DBGET
integrated database retrieval system
