KEGG   Streptomyces aurantiacus: GCM10017557_21610
Entry
GCM10017557_21610 CDS       T07085                                 
Symbol
rnj
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
sgm  Streptomyces aurantiacus
Pathway
sgm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sgm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GCM10017557_21610 (rnj)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sgm03019]
    GCM10017557_21610 (rnj)
Messenger RNA biogenesis [BR:sgm03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GCM10017557_21610 (rnj)
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: BCL27302
UniProt: A0A7G1NXF2
LinkDB
Position
complement(2607792..2609477)
AA seq 561 aa
MSHPHPELRLPPKLPQGGLRVTPLGGLGEIGRNMTVFEYDGRLLIVDCGVLFPEEEQPGI
DLILPDFSSIRDRLDDIEGIVLTHGHEDHIGGVPFLLREKPDIPLIGSKLTLALIEAKLQ
EHRIRPYTLEVKEGHRERIGPFECEFVAVNHSIPDALAVAIRTPAGMVVHTGDFKMDQLP
LDGRLTDLHAFARLSEEGIDLLLSDSTNAEVPGFVPPERDISNVLRQVFANASKRIIVAS
FASHVHRIQQILDAAHEYGRRVAFVGRSMVRNMGIARDLGYLKVPPGLVVDVKTLDDLPE
HEIVLVCTGSQGEPMAALSRMANRDHQIRIVQGDTVILASSLIPGNENAVYRVINGLTRW
GAKVVHKGNAKVHVSGHASAGELLYFYNICKPRNLMPVHGEWRHLRANAELGALTGVPHD
RIVIAEDGVVVDLIDGKARISGKVQAGYVYVDGLSVGDVGEPTLKDRKILGDEGIISVFV
VLDTSTGKITGGPHIQARGSGIDDSAFSDVLPRVVEVLERSAQDGVVEPHQMQQLIRRTL
GKWVSDTYRRRPMILPVVVEV
NT seq 1686 nt   +upstreamnt  +downstreamnt
ttgagtcatccgcatcctgaactccgtctgccgccgaagcttccccaggggggcctcaga
gtcaccccgctcggtggcctcggcgaaatcggccgaaacatgacggtcttcgaatacgac
ggccgccttctgatcgtcgactgcggcgtgctcttcccggaggaggagcagcctggcatc
gacctgatcctcccggacttcagttcgatcagggatcgcctcgacgacatcgagggcatc
gtcctcacgcacggccacgaggaccacatcggcggtgtcccctttctcctgcgcgagaag
ccggacatcccgctcatcggttccaagctgaccctcgctctcatcgaggcgaagctccag
gagcaccgcatccgcccgtacacgcttgaggtcaaggaggggcaccgggagcgcatcggt
cccttcgaatgcgagttcgtggcggtcaaccactcgatcccggacgccctcgcggtcgcc
atccgcacccccgcgggcatggtggtgcacaccggcgacttcaagatggaccagctcccg
ctggatggccgcctcacggacctgcacgccttcgcgcggctgagcgaggaaggcatcgac
cttctcctctcggactccacgaacgccgaggtcccgggcttcgtcccgcccgagcgtgac
atctcgaacgtgctgcgtcaggtcttcgcgaatgccagcaagcgcatcatcgtggccagc
ttcgccagccatgtgcaccgcatccagcagatcctcgacgccgcccacgagtacggccga
cgggtcgccttcgtcggccgctcgatggtccgcaacatgggcatcgcacgggacctcggc
tatctgaaggtcccgccgggcctggtggtggatgtcaagacactggacgacctcccggaa
cacgagatcgtcctcgtctgcaccggctcccagggcgagccgatggcggctctctcacgg
atggccaacagggaccaccagatccgcatcgtccagggcgacaccgtgatcctggcgtcg
tcgctgatcccgggcaacgagaacgcggtctaccgcgtcatcaacggcctgacccgctgg
ggcgccaaggtcgtccacaagggcaacgccaaggtgcacgtctcgggccacgcctccgcg
ggcgagctcttgtacttctacaacatctgcaagccacgcaacctgatgccggtccacggt
gaatggcgccacctgcgcgccaacgccgagctgggcgccctcaccggcgtgccgcacgac
cgcatcgtgatcgccgaggacggcgtggtcgtcgacctcatcgacggcaaggcccggatc
tccggcaaggtccaggcgggatacgtgtacgtcgacggcctctcggtcggcgatgtgggc
gagcccacgctgaaggaccgcaagatcctcggcgacgagggcatcatctcggtcttcgtc
gtgctggacaccagcacgggcaagatcaccggaggtccgcacatccaggcccgcggttcg
ggcatcgacgactccgccttcagcgacgtcctcccgagggtcgtcgaagtcctggagagg
tccgcccaggacggcgtcgtcgaaccccaccagatgcagcagctcatccgccgcacgctg
ggcaaatgggtctccgacacctaccgccgccggccgatgatcctgccggtcgtggtcgag
gtctga

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