Streptomyces aurantiacus: GCM10017557_48540
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Entry
GCM10017557_48540 CDS
T07085
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sgm
Streptomyces aurantiacus
Pathway
sgm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GCM10017557_48540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgm03019
]
GCM10017557_48540
03400 DNA repair and recombination proteins [BR:
sgm03400
]
GCM10017557_48540
Enzymes [BR:
sgm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10017557_48540
Messenger RNA biogenesis [BR:
sgm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
GCM10017557_48540
DNA repair and recombination proteins [BR:
sgm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GCM10017557_48540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
RecQ_Zn_bind
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
BCL29995
UniProt:
A0A7G1PA59
LinkDB
All DBs
Position
5582150..5584312
Genome browser
AA seq
720 aa
AA seq
DB search
MDAVVEEAAGTGDGTMGGAGVMTGMGAVAGPATAGGTSGGVDGMPDGGSGGGPGGGDSAA
LGTLHRVFGYEAFRGEQEAVIDHVVSGGDAVVLMPTGGGKSLCYQIPALVRPGTGVVVSP
LIALMQDQVDALRALGVRAGFMNSTQDFDERRVVEAEFLAGELDLIYLAPERLRLESTLG
LLKRGRISVFAIDEAHCVSQWGHDFRPDYLSLSLLGERWPDVPRIALTATATHATHQEIT
ERLGMPDARHFVASFDRPNIQYRVVPKADPKKQLLAFLQEEHAGDAGIVYCLSRNSVDKT
AEFLARNGIAAVPYHAGLDSGTRAAHQSRFLREDGLVVCATIAFGMGIDKPDVRFVAHLD
LPKSVEGYYQETGRAGRDGLPSTAWMAYGLNDVIQQRKMIQSSEGDEAFRRRAAAHLEAM
LALCETAQCRRTQLLAYFGQDPETEACGNCDTCLVPPETWDGTVAAQKVLSTVVRLQRER
GQKFGAIQIVDILLGRKTAKVIQFDHDQLSVFGIGEDLDEGEWRGVVRQMLAQGLLAVEG
AYGTLVLTEASGTVLRREREVPMRKELPKPVTSRGSSSTSGSGRAERKAKAAAAAAEMPS
ELLPAFEALRAWRAGQAKEQGVPAYVIFHDATLREIATLWPTTVAELGGISGIGEKKLAT
YGEGVVGVLASLEQPSGGAKGVGNPEGPVPVPVSPQPRSDGDPGLHWPEMDAEPEPEDWI
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtggacgcagtggtcgaggaggccgcaggtacgggggacgggacgatgggcggagcgggt
gtgatgaccggaatgggcgcggtggcgggaccggccacggcgggcgggacgtcgggcggt
gtcgacggcatgccggacggcggatcgggcggtgggccgggcggcggcgacagtgcggcg
ctcggcaccctgcaccgggtcttcggctacgaggccttccggggggagcaggaagccgtc
atcgaccatgtggtgagcggcggggacgcggtcgtgctcatgccgacgggcggcggaaag
tcgctctgctaccagatccccgccctggtcagaccgggtacgggcgtcgtggtctcccct
ctcatcgcgctgatgcaggaccaggtggacgcgctgcgggcgctcggcgtgcgcgccggg
ttcatgaactccacgcaggacttcgacgagcggcgggtggtcgaggccgagttcctcgcg
ggcgagctcgacctgatctacctcgcgccggagcggctgcgcctggagtccacgctcggc
cttctcaagcgcggccggatctccgtcttcgcgatcgacgaggcgcactgcgtgtcccag
tggggccacgacttccgccccgactacctgtcgctgtcgctgctgggcgagcgttggccc
gacgtaccgcggatcgcgctgaccgcgacggccacgcacgcgacgcaccaggagatcacc
gagcgcctgggcatgccggacgcccgccacttcgtggccagcttcgaccggcccaacatc
cagtaccgggtggtgcccaaggccgaccccaagaagcagctgctggccttcctccaggag
gagcacgcgggcgacgcgggcatcgtgtactgcctctcgcgcaactccgtcgacaagacg
gccgagttcctcgcccgcaacggcatcgcggcggtgccgtaccacgcggggctcgactcg
ggcacgcgcgccgcccaccagtcgcggttcctgcgcgaggacggcctggtggtgtgcgcg
accatcgccttcggcatgggcatcgacaagccggacgtccggttcgtcgcccacctcgac
ctgccgaagtccgtcgagggctactaccaggagacgggccgcgcgggccgcgacggactg
ccgtccacggcctggatggcctacggcctgaacgacgtcatacagcagcgcaagatgatc
cagtcgagcgagggcgacgaggcgttccgccgccgggcggccgcccatctcgaagcgatg
ctcgcactgtgcgagaccgcacagtgccggcgcacccagttgctcgcctacttcggccag
gatcccgagaccgaagcctgcggcaactgcgacacgtgcctggtcccgcccgagacctgg
gacggcacggtcgcggcccagaaggtgctgtccaccgtggtgcggctgcagcgcgagcgg
ggacagaagttcggggcgatacagatcgtcgacatcctgctcgggcgcaagacggccaaa
gtcatccagttcgatcacgaccagctgtccgtgttcggcatcggcgaggacctggacgag
ggcgaatggcgcggtgtcgtacggcagatgctggcccagggcctcctcgcggtcgagggc
gcgtacgggacgctggtactgaccgaggcgagcgggacggtgctgcggcgcgagcgggag
gtgccgatgcgcaaggagctgccgaagccggtgacctcccgcggctcgtcctccacatcc
ggttccggccgggccgagcgcaaggccaaggcagcggccgccgcggccgagatgccctcg
gagctgctccccgccttcgaggccctgcgcgcctggcgtgccggacaggccaaggagcag
ggcgtcccggcgtacgtcatcttccacgacgccacgctgcgggagatcgccacgctgtgg
cccaccaccgtggctgaactcggcggcatcagcgggatcggcgagaagaagctcgcgacg
tacggggagggcgtggtcggagtgctcgcgtccctggagcagccgtccggaggagcgaag
ggggtggggaaccccgagggaccggtgccggtgccggtgtcgccgcagccgcggagtgac
ggtgaccccggcctgcactggcccgagatggatgcggagcccgagccggaggactggata
tag
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