Streptomyces aurantiacus: GCM10017557_56750
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Entry
GCM10017557_56750 CDS
T07085
Symbol
hrdA
Name
(GenBank) RNA polymerase principal sigma factor HrdA
KO
K03086
RNA polymerase primary sigma factor
Organism
sgm
Streptomyces aurantiacus
Pathway
sgm02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgm00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GCM10017557_56750 (hrdA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgm03021
]
GCM10017557_56750 (hrdA)
Transcription machinery [BR:
sgm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GCM10017557_56750 (hrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Gemini_C4
HTH_28
KORA
Motif
Other DBs
NCBI-ProteinID:
BCL30816
UniProt:
A0A7G1PAD0
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All DBs
Position
6510498..6511769
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AA seq
423 aa
AA seq
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MDSGEAVDPIPDVPLPHASAATFLEVAPVQTQTQTLTKTQTQTQTQTGKSAGRSTDTEAD
ADALAAVPPQNRAAHHPETTTAEPEDTPEPPPAVLVEAGTEIETETPEPVELPRGRTDTG
GPSSDLFRQYLREIGRIPLLTAVEEVELARRVEAGLFAEERLRLASDLDSQLALDLDKLV
VMGRMAKRRLIEANLRLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFST
YATWWIRQAMSRALADQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAVHLDL
TGERVSEVLRLAQEPVSLHAPVGEEDDVALGDLIEDGDATSPVESAAFLLLREHLEAVLS
TLGERERKVVQLRYGLADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRG
YLD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggacagcggcgaggccgtcgaccccatccccgacgtaccgctgccgcacgcctcagca
gcgacattcctggaggtcgcccccgtgcagacccagacccagaccctgaccaagacgcaa
acgcagacacagacacagaccggcaagagcgccggtcggagcacggacacggaagcggac
gccgatgccctggcggcggtaccgccgcagaaccgtgccgcacaccaccccgagacgacc
acggcggagccggaagacacgccggagccgccccccgccgtcctcgtggaggccgggacc
gagatcgagaccgagacgccggagccggtcgaactgccccgcggacgtacggacaccggc
gggccctcgtccgacctgttccgccagtacctgcgggagatcggccgtatcccgctcctc
accgcggtggaggaggtggagctcgcccgccgggtcgaggcgggcctcttcgccgaggag
aggctccggctggcctccgacctcgacagccaactagcccttgacctcgacaagttggtg
gtcatgggccggatggccaaacgccgcctcatcgaggcgaacctgcggctcgtcgtctcc
gtcgccaagcggtacgtgggccgcgggctgaccatgctcgacctggtccaggagggaaac
ctgggcctcatcagggcggtcgagaagttcgactacgcccgcgggtacaagttctcgacg
tacgcgacctggtggatccgccaggccatgtcccgggccctcgccgaccaggcccggacg
atccgggtccccgtccacgtggtcgagctgatcaaccgcgtcgtacgggtacagcggcgc
atgctccaggaacgggggtacgagccgacgcccgaggaggtcgccgtacatctcgacctg
accggcgagcgggtcagcgaggtgctccggctggcccaggagcccgtgtccctgcacgcc
cccgtgggcgaggaggacgacgtggccctcggcgacctcatagaggacggggacgcgacg
agcccggtggagtcggcggcgttcctgctcctgcgggagcacctggaggcggtgctctcc
acgctcggcgagcgcgaacgcaaggtggtgcagctgcggtacgggctggccgacgggcgg
ccgcgcacgctggaggagatagggcggatcttcggcgtcacgcgggagcgcatccgccag
atcgagtcgaagaccctcaacaaactccgcgaccacgcgttcgcggaccagctgaggggc
tacttggactga
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