Streptomyces aurantiacus: GCM10017557_61340
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Entry
GCM10017557_61340 CDS
T07085
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sgm
Streptomyces aurantiacus
Pathway
sgm03030
DNA replication
sgm03430
Mismatch repair
sgm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM10017557_61340 (dnaE)
03430 Mismatch repair
GCM10017557_61340 (dnaE)
03440 Homologous recombination
GCM10017557_61340 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgm03032
]
GCM10017557_61340 (dnaE)
03400 DNA repair and recombination proteins [BR:
sgm03400
]
GCM10017557_61340 (dnaE)
Enzymes [BR:
sgm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM10017557_61340 (dnaE)
DNA replication proteins [BR:
sgm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM10017557_61340 (dnaE)
DNA repair and recombination proteins [BR:
sgm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM10017557_61340 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Tsr1_G-like
Motif
Other DBs
NCBI-ProteinID:
BCL31275
UniProt:
A0A7G1PDX9
LinkDB
All DBs
Position
7022840..7026382
Genome browser
AA seq
1180 aa
AA seq
DB search
MTKPPFTHLHVHTQYSLLDGAARLKDMFDACNEMGMSHIAMSDHGNLHGAYDFFHSAKKA
GVTPIIGIEAYVAPESRRNKRKIKWGQPHQKRDDVSGSGGYTHKTIWAANSTGLHNLFKL
SSDAYAEGWLQKWPRMDKETISQWSEGLIASTGCPSGELQTRLRLGQFDEAVKAASEYQD
IFGKDRYFLELMDHGIEIESRVREDLLRVGKKLGIPPLVTNDSHYTYAHEATAHDALLCI
QTGKNLSDPDRFRFDGTGYYLKSTDEMYAVDSSDAWQEGCANTLLVAEQIDTSGMFEARN
LMPKFDIPDGFTEVTWFQEEVRRGMERRFPGGIPDDRQKQAEYEMDVIIQMGFPGYFLVV
ADFIMWAKKQGIAVGPGRGSAAGSIVSYAMGITDLDPIPHGLIFERFLNPERVSMPDVDI
DFDERRRVEVIRYVTEKYGADKVAMIGTYGKIKAKNAIKDSARVLGYPYAMGDRLTKAMP
ADVLGKGIDLNGITDPKHPRYGEAGEIRGMYENEPDVKKVIDTAKGVEGLVRQMGVHAAG
VIMSSEPIVDHAPLWTRHTDGVTITQWDYPQCESLGLLKMDFLGLRNLTIMDDAIKMVKA
NKGIDLEMLALPLDDPKTFELLCRGDTLGVFQFDGGPMRSLLRQMQPDNFEDISAVSALY
RPGPMGMNSHINYAERKNKRQEITPIHKELEEPLEEVLAVTYGLIVYQEQVQKAAQIIAG
YSLGEADILRRVMGKKKPEELAKNFVLYQAGARKNGYSDEAIQALWDVLVPFAGYAFNKA
HSAAYGLVSYWTGYLKANYPAEYMAALLTSVKDDKDKSAVYLNECRRMKIKVLPPNVNES
EQNFAAQGDDVILFGLSAVRNVGTNVVESIIRSRKAKGKYGSFPDYLDKVEAVACNKRTT
ESLIKAGAFDTMGHTRKGLTAHFEPMIDNVVAVKRKEAEGQFDLFGGMGEEDNTEPGFGL
DVEFTDDEWDKAYLLAQEREMLGLYVSDHPLFGLEHVLSDKADAGIAQLTGGEHGDGAIV
TIGGIISGLQRKMTKQGNAWAIATVEDLAGSIECMFFPATYQLVSTQLVEDTVVFVKGRL
DKREDIPRLVAMELQVPDVSNAGTNAPVILTIPALKITPPMVSRLGEILSHHRGESEVRI
RLQGPSRTTVLRLDRHRVKPDPALFGDLKVLLGPACLATG
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaagccgccgttcacgcacctgcacgtccacacccagtactcgctgctggacggt
gccgcgcggctgaaggacatgttcgacgcgtgcaacgagatgggcatgtcccacatcgcg
atgtccgatcacggcaacctccacggggcgtacgacttcttccattcggccaagaaggcg
ggcgtcacgccgatcatcggcatcgaggcgtacgtcgcccccgagtcgcggcgcaacaag
cgcaagatcaagtggggccagccgcaccagaagcgcgacgacgtgtccggttcgggtggt
tacacgcacaaaacgatctgggcggcgaacagcacggggctgcacaacctcttcaagctc
tcctcggacgcgtacgccgagggctggctgcagaagtggccccgcatggacaaggagacc
atctcccagtggtccgagggtctgatcgcctccaccgggtgcccctccggtgagctgcag
acccggttgcgcctgggccagttcgacgaggcggtgaaggcggcctcggagtaccaggac
atcttcggcaaggaccggtacttcctggagctgatggaccacggcatcgagatcgagagc
cgggtccgcgaggacctgctgcgggtcggcaagaagctgggcatcccgccgctggtgacg
aacgactcgcactacacgtacgcgcacgaggcgaccgcccacgacgcgctgctgtgcatc
cagaccggcaagaacctctccgacccggaccgcttccgcttcgacggcaccgggtactac
ctgaagtcgacggacgagatgtacgccgtcgactcctcggacgcctggcaggagggatgc
gcgaacaccctcctggtggccgaacagatcgacacctccggcatgttcgaggcgaggaac
ctcatgccgaagttcgacatcccggacggcttcaccgaggtcacctggttccaggaggag
gtgcgccgcggcatggagcgccgcttccccggcggcatccccgacgaccgccagaagcag
gccgagtacgagatggacgtcatcatccagatggggttcccggggtacttcctcgtcgtc
gccgacttcatcatgtgggccaagaagcagggcatcgcggtcggtccgggccgtggctcc
gcggccggttcgatcgtgtcgtacgccatgggcatcaccgacctcgacccgatcccgcac
ggtctgatcttcgagcggttcctgaaccccgagcgggtctccatgcccgacgtcgacatc
gacttcgacgagcgcaggcgcgtcgaggtgatcaggtacgtgacggagaagtacggcgcc
gacaaggtcgccatgatcggcacgtacggcaagatcaaggcgaagaacgccatcaaggac
tccgcgcgcgtgctgggctacccgtacgcgatgggcgaccggctcaccaaggccatgccc
gccgacgtcctcggcaagggcatcgacctgaacggcatcaccgaccccaagcacccgcgc
tacggcgaggccggcgagatccgcgggatgtacgagaacgagccggacgtcaagaaggtc
atcgacaccgccaagggcgtcgagggcctggtccggcagatgggtgtgcacgcggccggc
gtgatcatgtccagcgagcccatcgtcgaccacgccccgctctggacgcgccacaccgac
ggcgtcacgatcacccagtgggactacccgcagtgcgagtcgctcggcctgctcaagatg
gacttcctgggcctgcgcaacctcacgatcatggacgacgccatcaagatggtgaaggcc
aacaagggcatcgacctggagatgctcgccctcccgctggacgaccccaagaccttcgaa
ctgctctgccgcggtgacaccctcggcgtcttccagttcgacggcggcccgatgcgctcc
ctgctccgccagatgcagcccgacaacttcgaggacatctccgccgtctcggccctctac
cggccgggcccgatgggcatgaactcgcacatcaactacgcggagcgcaagaacaagcgc
caggagatcaccccgatccacaaggagctggaggagccgctcgaagaggtcctggcggtc
acctacggcctgatcgtctaccaggagcaggtccagaaggccgcccagatcatcgccggc
tactcgctcggcgaggccgacatcctccgtcgcgtgatgggcaagaagaagcccgaggaa
ctggcgaagaacttcgtcctctaccaggcgggcgcccggaagaacggctacagcgacgag
gcgatccaggccctgtgggacgtactggtcccgttcgccggatacgcgttcaacaaggcc
cactccgccgcgtacggactggtgtcgtactggaccggctatctgaaggcgaactacccg
gccgagtacatggccgcgctgctcacctcggtcaaggacgacaaggacaagtcggcggtc
tacctcaacgagtgccggcgcatgaagatcaaggtcctgccgccgaacgtcaacgagtcc
gagcagaacttcgccgcgcagggcgacgacgtgatcctcttcggcctctcggccgtccgc
aacgtcgggacgaacgtcgtcgagtcgatcatccgcagccgcaaggccaaggggaagtac
ggctcgttccccgactacctcgacaaggtcgaggcggtcgcctgcaacaagcgcaccacg
gaatcactcatcaaggccggcgccttcgacacgatggggcacacccgcaagggcctcacc
gcgcacttcgagccgatgatcgacaacgtggtcgcggtcaagcgcaaagaggccgagggc
cagttcgacctcttcggcggcatgggcgaggaggacaacaccgagcccggcttcggcctg
gacgtggagttcaccgacgacgagtgggacaaggcctacctgctcgcccaggaacgggag
atgctcggcctgtacgtctccgaccacccgctcttcggcctggagcacgtgctgtccgac
aaggccgacgcgggcatcgcccaactcaccggcggtgagcacggggacggtgcgatcgtc
accatcggcggcatcatctccggcctccagcgcaagatgaccaaacagggcaacgcctgg
gccatcgccaccgtcgaggacctcgccggctccatcgagtgcatgttcttccccgcgacc
taccagctggtgtcgacgcaactcgtcgaggacaccgtggtgttcgtcaagggccgcctc
gacaagcgcgaggacatcccccgcctcgtcgcgatggagctgcaggtcccggacgtgtcg
aacgcgggcaccaacgcgcccgtgatcctcaccatcccggccctgaagatcaccccgccg
atggtcagcaggctcggcgagatcctcagccatcaccggggcgagagcgaggtgcgcatc
aggctccagggcccgagcaggaccaccgtgctgcggctcgaccggcaccgggtgaagccc
gaccccgcgctcttcggtgacctgaaagtgctgctgggcccggcctgtctggcgacgggc
tga
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