Saprospira grandis: SGRA_0397
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Entry
SGRA_0397 CDS
T01764
Symbol
sbcC
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sgn
Saprospira grandis
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgn03400
]
SGRA_0397 (sbcC)
DNA repair and recombination proteins [BR:
sgn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SGRA_0397 (sbcC)
Archaeal homologous recombinant proteins
SGRA_0397 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
nSTAND_NTPase5
NTPase_1
AAA_21
nSTAND3
NYN
FtsK_SpoIIIE
ABC_tran
AAA_16
SMC_N
Motif
Other DBs
NCBI-ProteinID:
AFC23136
UniProt:
H6L900
LinkDB
All DBs
Position
complement(375623..379291)
Genome browser
AA seq
1222 aa
AA seq
DB search
MKILKLYIQNINSLQAEEPICIDFEAAPLKEHSLFLIAGPTGSGKTTLLDAMTLALYGKA
ARFSGTQGSDHGKESNMISKGQKNAFSALEFSAKGGVYRAEWTVRINRNGKLELPKQRLV
QIISEKKQPILATKKREFHKKIGELLDGLGFEGFCRSVLLAQGDFIAFLRDKENRSDILA
RITSAEQYSEISKAAFQKAKEEKEKLEALEKQLQAVDLLSAEELLALETALVQKKAEAEE
RQQKVKELEGQIKLAEQKKECETALLELQQQKAAWAKNWAAQEPEHFLLAQHQKAEKAGG
ELKRLSQLETEIKALLVQQRKDEEQLAEKENALAKEATILKELAQKLAQEEAQENDLQAQ
WQACERLDQEIKFAQKKLAETEAALEKILAQEKKQAAEQDQLAKQKEKSEQKAAAVALAQ
KEQAALADSPEIIEQLQALAQEIEQLHKAGNAQRAEEKKQKKAKKELEQQLEQLKNKLAE
EAKEEQALSEALAKEELSLAELLPKKTLLEKDLAQAQEIQGPWQEHIDLRKGIQQAEEQL
AKTLAEKTKNEEELQPLQENEARNKERLTDLQKHIASQERLCELLKQQMGAAQYRQYLEE
GKACALCGSTEHPHAHEAFDQEGKQKELQAEQERLADLKAKQQEIQSAQSKLEQKSSVLA
DRLKRLEQEKESLNQSVEQLWAKLDALPQLNWSEKNLKTLELAELQALYQLFGEEQAQKT
KQLKLLVDIQHKWAILAEKKKATKNNYAEKEQQKEKMLESLAQLGAELAEKLEQDQKILQ
QAQSALAQLGRELSSSKQLKQEIAVLKSDYKNYQALLEQAQKLQQELAIMAVNWEKSSKD
LQRCQKEGEEQKEKQLAEKAALLQLEKQRKEQFGDLQVEKARKKFVEQLAQLRKSEKKAQ
TLLAQLQSEKEALKGGLRQLGQQLQGNEKEEAELRLKLADLAGQLGFENLEKLSQALLPA
KKAAAIAEAKEKAAQEKLRLDDRAEQLELQAKNIAENWPNLAPLADYLAEKERLQKITKE
EQAEIGRTLERLDRQKEQEKKVKRIQLAHKKQEKETDRWILLKNEIGSADGKKFRDIANA
ISLERLLYYANQHLRSFAQNRYELEKESYDSLNINVIDAFQAGSKRPLSTLSGGETFLCS
LALALALSNLSAKQQMQSLFIDEGFATLDQETLGFALQLLERLEHEGKRIGLISHLELLK
ERIPCQIQLQKKGEGRSELQIV
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctaaaactctatatccaaaatattaactctttacaagcagaagagcccatt
tgcattgattttgaagcggcgcctttaaaagagcacagtctttttttaattgctggacca
acaggctctggaaaaacaactttattagatgccatgactttggcgctttatggaaaagcc
gcccgttttagtggcacgcaaggaagcgaccacggaaaagaaagcaatatgatttctaaa
ggccaaaaaaatgctttttcggccttagagttttcggccaagggcggagtttatagagcg
gagtggacagtgcgcatcaatagaaacggaaaattagagctgcccaagcaacgattggtg
caaattatttcggaaaaaaaacagcccattttagccactaaaaaaagagaattccataaa
aaaataggagaacttttagatggattgggttttgaaggcttttgtcgctcggtgcttttg
gcccaaggcgattttattgcctttttgcgcgacaaagaaaatcgctcagatattttggct
cggattacctcggcagagcagtatagcgaaatttctaaagccgcatttcaaaaagcaaaa
gaggaaaaagaaaagctagaagcattagaaaagcaattgcaggccgttgatttattatcg
gcagaagaattattggccctagaaacggctttggtccaaaaaaaggccgaagcagaagag
cgacagcaaaaagtaaaggaactagaggggcaaattaaattggctgagcaaaaaaaagag
tgcgaaactgccttgctcgaattgcagcaacaaaaagcagcttgggccaaaaattgggca
gcccaagagccagaacattttttattggcccaacaccaaaaggccgaaaaagctgggggc
gaattgaagcgcctaagccagttggagacagaaattaaggcgcttttggtgcagcaaaga
aaagatgaagagcaattggccgaaaaagaaaatgctttggccaaagaagctactatctta
aaagagctggcccaaaaactagcccaagaagaggcccaagaaaatgatttgcaggcgcaa
tggcaggcctgtgaacgcttggatcaggaaattaaatttgcgcaaaaaaaattggccgaa
acagaagcagccctagaaaaaatattggcccaagaaaaaaaacaagctgccgaacaggac
caattggccaagcaaaaagaaaaaagcgagcaaaaagcggctgcggtagccttggcccaa
aaagaacaggccgccctagccgatagtccagaaattattgaacaattgcaggccttggcc
caagaaattgagcaattgcataaggccggaaatgcgcagcgagccgaagaaaaaaagcaa
aaaaaggccaaaaaagagctagagcaacaattagaacaacttaaaaataaattagccgaa
gaagctaaggaagagcaagccctttcggaagctttggccaaagaagaactaagtttagcg
gagctgcttcccaaaaagacgcttttggaaaaagatttggcccaagcccaagaaattcaa
gggccttggcaagaacatatcgatttgcgcaaggggattcagcaagcggaagagcaactg
gccaaaactttggccgagaaaacaaaaaatgaagaagaattacagcccctgcaagaaaat
gaggccagaaacaaagagcgtttgaccgatctgcaaaaacatattgcttctcaagagcgc
ctttgtgaattgctcaagcaacaaatgggggcggcccagtatcgccaatatttagaagag
ggaaaagcctgtgcactttgtggatctacggaacatccgcatgcgcatgaagcctttgac
caagaaggcaagcaaaaagaattgcaggccgaacaagagcgtctggccgatttaaaagca
aaacagcaagaaattcaatcggcgcagagcaaattggaacaaaaaagttctgttttagct
gatcgtttaaagcgattggagcaggaaaaagaaagcctgaatcaatcggtagagcaattg
tgggccaaactagatgccctgcctcaattgaattggtccgaaaaaaacttaaaaacctta
gagcttgcagaattgcaggcactttatcaactttttggcgaagagcaagcgcaaaaaaca
aagcaactcaaattattagtggacattcagcataagtgggccattttggccgaaaaaaag
aaggccacaaaaaataattatgcagaaaaagagcagcaaaaagaaaaaatgctcgaaagc
ttggcgcaattgggggctgaactggcagaaaaactagagcaggaccaaaaaatattgcag
caggcgcaatcggctttggcccaattgggcagggaattgtcgagctctaaacagctcaag
caagaaattgcggttttaaaaagcgactacaaaaattatcaggctttattggagcaagcg
caaaagttgcaacaagaactggccattatggcggtaaattgggaaaaatcgagcaaagat
ttgcagcgttgccaaaaagagggagaggaacaaaaagaaaagcaattggctgaaaaagcg
gccttattgcagttggaaaagcagcgaaaagagcagtttggcgatttgcaggtagaaaaa
gcccgcaaaaaatttgtcgagcaattggcccaattaagaaaatcggagaaaaaagcacaa
actttattggcccagctacaaagcgaaaaagaggctttaaaaggaggcttgcggcagttg
gggcagcaattgcagggcaatgaaaaagaggaagccgaattgcgtttgaaattagccgat
ttggctgggcagttagggtttgaaaacctagaaaaattatcgcaggcgcttttgcccgct
aaaaaagccgcagctattgccgaggccaaggaaaaagcggcccaagaaaaattgcgttta
gatgatcgagcagagcagttagagctacaggcaaaaaatatagccgaaaattggcccaat
ttggcccccttagccgattatttggccgaaaaagagcggttgcaaaaaataacaaaggaa
gaacaagccgaaattgggcgtaccttagagcgattggaccgacaaaaagagcaggagaaa
aaagtgaagcgcatacagttggcccataaaaaacaagaaaaagaaaccgaccgctggatt
ttacttaaaaatgaaattggtagcgccgacgggaaaaagtttagagatattgccaatgcg
atctctttggagcgactactctattatgccaaccaacatttgagaagttttgcgcaaaat
cgctacgaattggaaaaagaaagctacgacagcttaaatattaacgtcattgatgctttt
caggctggatctaagcggccactctctacactttctggtggagaaacttttttgtgcagc
ttggcgctggctttggccctctctaatttatcggccaaacaacaaatgcaatctttattt
atcgatgaaggttttgccaccttagatcaagaaacattgggatttgccttgcaattattg
gagcgtttggagcatgaaggcaaacgcatcggcttaatttctcatttagaattgctcaag
gaaagaattccctgccaaattcaattgcagaaaaaaggagaaggccgcagcgaattgcaa
attgtttaa
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