Saprospira grandis: SGRA_1416
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Entry
SGRA_1416 CDS
T01764
Symbol
recJ
Name
(GenBank) single-strand DNA specific exonuclease
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
sgn
Saprospira grandis
Pathway
sgn03410
Base excision repair
sgn03430
Mismatch repair
sgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SGRA_1416 (recJ)
03430 Mismatch repair
SGRA_1416 (recJ)
03440 Homologous recombination
SGRA_1416 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgn03400
]
SGRA_1416 (recJ)
DNA repair and recombination proteins [BR:
sgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SGRA_1416 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SGRA_1416 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SGRA_1416 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
ADH_zinc_N
MT-A70
SpoU_sub_bind
Motif
Other DBs
NCBI-ProteinID:
AFC24151
UniProt:
H6L7T0
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All DBs
Position
1441017..1442711
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AA seq
564 aa
AA seq
DB search
MKAWKLRSFNSTTAQQLQEALKVHPVFCQLLVQREVHNFEQAKAFFRPNLAHLHAPNLLQ
GLPAALARLGQALARGEKTLLFADYDVDGLAALVILHRILDQKLPLDYLLPDRFEQGYGL
SVYAVEFAQAVNCSLIIALDCGSRDHKALALAKKLGIDVIIVDHHELARQQQPKSAALIN
PKQANCNYPNPEITAAGLAFKLAQALVEQENWSEAPLWPLLQWVALSLAADQAPLTGENR
ILAHHGLRFLEEEGEEILQQIQQRLERPRPYNMQALYFGLVPLLNAPGRMGHAQTAADCL
LAKGEKAQKKKLELLFLQNQARKRAQEEVYRDIQRILQEQGQWMERSLLLLAQPHWPLGV
LGILASRLSKEWGRPCLLLGQNKAGNWQGSGRCPEGQELLPAVEACSAQLLQYGGHSRAL
GLELKKEELAAFEAALEAQLYQQMSRGPEPEAIAIDAQLDFSLIGPKFWKLLKQFAPFGP
GNPNPCFMSKNLCDSGYSKAINQKHLRLFLRQGQGSPQEGIAYNFMEHFEQIKSRKPFHL
CYQLEEHFYRGRRKLQFVARDIKF
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcttggaaacttcggtcttttaatagcactaccgctcagcagctacaagaggcg
ctgaaggtgcatcctgttttttgccagttgttggtccaaagagaggtgcataattttgag
caggccaaggccttttttcggcccaatttggcccatttgcatgcccccaatttgctgcag
ggcctgcctgctgccttggctcgtttggggcaggccttggctagaggagaaaaaaccctg
ctttttgccgactatgatgtagacggcctggcggccttagttattttgcatcggatattg
gaccaaaagctgcccttagactaccttttgcccgatcgttttgagcagggctatggcctt
tctgtttatgcggtagagtttgcgcaggccgtcaattgctcccttattattgctttagat
tgtggcagtagggaccataaagctttggctttggccaaaaagctgggcattgatgtgatt
attgtggaccatcatgaattggctcgtcagcagcagcccaaatcggccgctttgatcaat
cccaagcaggccaactgcaattatccgaatccagaaattacggctgcgggcttggccttt
aaactcgctcaggccttggtggagcaagaaaattggtccgaggcgccactttggccgctt
ttgcagtgggtagcgctcagtttggcggcagaccaagccccattgactggcgaaaatcga
attttggcccatcatggattgcgttttttagaggaagaaggcgaagaaattttgcagcag
attcagcagcgtttggagcggcctaggccctataatatgcaggccctttattttggtttg
gtccccttactcaatgcgccggggcggatggggcatgcccaaaccgctgccgattgtttg
ttggccaagggagaaaaagcgcaaaagaagaaattggagcttttatttttgcaaaatcag
gctaggaaaagagcgcaagaagaggtctatcgggacattcagcgcatcttacaagagcag
gggcaatggatggagcgttcgcttttattgttagcacagccccattggcccctaggcgtt
ttgggcattttggccagtcgattgagcaaagaatgggggcggccctgccttcttttgggc
caaaataaggcgggaaactggcagggatcggggcgttgccccgagggccaagaattactg
cctgcggtagaggcttgttcggcgcaattactgcaatatggtggacatagtcgggcccta
ggtttagagctcaaaaaagaagaattggctgcttttgaggccgccctagaggcccagctt
tatcagcaaatgagtagagggccagaacccgaggccattgccatagatgcgcagctagat
ttttctttaattgggccaaaattttggaaactgctcaagcaatttgcgccctttgggccg
ggcaatcccaatccttgtttcatgagcaaaaacctttgcgatagtggctactccaaagcc
atcaaccaaaagcatttgcgtttatttttgcggcagggccaagggagtccgcaagaaggc
attgcctataactttatggaacattttgagcaaatcaagagtcgcaagccctttcaccta
tgctatcagttagaagagcatttttatcggggtcggagaaagctacaatttgtagctcgg
gacattaagttttaa
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integrated database retrieval system
