Saprospira grandis: SGRA_1640
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Entry
SGRA_1640 CDS
T01764
Symbol
lpxC
Name
(GenBank) bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
sgn
Saprospira grandis
Pathway
sgn00061
Fatty acid biosynthesis
sgn00540
Lipopolysaccharide biosynthesis
sgn01100
Metabolic pathways
sgn01212
Fatty acid metabolism
Module
sgn_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SGRA_1640 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SGRA_1640 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sgn01005
]
SGRA_1640 (lpxC)
01004 Lipid biosynthesis proteins [BR:
sgn01004
]
SGRA_1640 (lpxC)
Enzymes [BR:
sgn01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
SGRA_1640 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
SGRA_1640 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
sgn01005
]
Lipid A
SGRA_1640 (lpxC)
Lipid biosynthesis proteins [BR:
sgn01004
]
Fatty acid synthase
Component type
SGRA_1640 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
MaoC_dehydratas
Motif
Other DBs
NCBI-ProteinID:
AFC24375
UniProt:
H6LA12
LinkDB
All DBs
Position
complement(1651059..1652444)
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AA seq
461 aa
AA seq
DB search
MRKQQCLKQAVTIVGKGLHSGIDVELKILAAEAGHGIQFQRMDLPEAPVIKADAANVFKT
DRHTVIGDETAYVATVEHLMAAFYALGIDNALVEINAAELPILDGSAQPFIEAFKAVGLE
EQAAEKPSLKIKEPISVQLGESEISIYPAEELEVMVTVDFQSAVLPAQFSRFKASQESFE
EAIAPARTFVFLHELSALLQHGLAKGGQPDSALVFVEQLPTAEQKAALEKQYQQTIDVQS
TGLLPGQSLRFSNEAARHKLLDLMGDLALLGFDIVGRIVAHKPGHGVNNKMALALRQLAI
KERKTKNIPVYDPKQEAVYNIEDIFGKLQHRYPFLLIDKIIDLSPQHVVAVKNVTFNEPF
FVGHFPGHPIMPGVLQIEAMAQTGGILVMEAIDDPLSYDTYFLKIDKARFRRPVVPGDTL
IFRLDLMRPIRRGLVEMQAKAYVGDKLVAEAELLAQIIKRK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacaacagtgcctaaagcaggcggtaacaatagttggaaaaggcttacattca
gggattgatgttgaacttaaaatcttggcagccgaggctggccatggtattcagtttcaa
cggatggatttgcctgaagcccctgtcattaaggctgatgccgccaatgttttcaaaacc
gatcgacataccgtaattggcgatgaaaccgcttatgtggctactgtagagcatctgatg
gccgctttttatgctttgggtattgataatgctttggttgaaattaacgctgccgaattg
cccattttggacggtagtgcccagccttttattgaggcttttaaggccgttggcctagag
gaacaggctgccgaaaagccttcgcttaaaattaaggaacctatttcggtgcagctaggc
gaaagcgaaattagtatttaccccgccgaggaactagaagtgatggtgaccgtagatttt
cagtctgccgttttacccgctcagtttagccgctttaaagctagccaagaaagctttgaa
gaagccattgcacccgcccgtacttttgtctttttgcatgagctctctgcacttttgcag
catggcttggccaagggcggacagcccgattcggccctcgtttttgtagaacaactacct
acagccgaacaaaaggcggccctagaaaaacaatatcagcaaactattgatgtgcaaagc
actggcttgctgcccggtcaaagtctccgctttagcaatgaggccgcccgccacaaattg
ctcgatcttatgggtgatttggcgcttttgggttttgatattgtgggacgaattgtggcc
cataaacccggacatggcgtcaataacaaaatggccctagcactccggcaattggccatc
aaagaacgcaaaacgaagaatattcctgtctacgaccctaaacaggaagccgtatataat
attgaagatatttttgggaaactgcaacatcgctatcccttcttgctcattgacaaaatc
atcgacctttcgccccaacatgtggtggcggtaaagaacgtgacctttaatgagcccttt
tttgttggacatttccctggtcaccccattatgcccggtgtgcttcaaattgaagccatg
gcccaaactggcgggattttagtcatggaggctatcgatgatccgctctcttacgacact
tattttctcaaaattgataaggcccgcttccgcaggcctgtagtccccggagatacgctc
atcttccgtctagacctaatgcgcccaattagaaggggcttggtcgaaatgcaagctaag
gcctatgttggtgataaactagtggccgaagccgaattattagctcaaattatcaagcgt
aagtaa
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