Saprospira grandis: SGRA_1819
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Entry
SGRA_1819 CDS
T01764
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sgn
Saprospira grandis
Pathway
sgn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SGRA_1819 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgn03021
]
SGRA_1819 (rpoA)
03400 DNA repair and recombination proteins [BR:
sgn03400
]
SGRA_1819 (rpoA)
Enzymes [BR:
sgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SGRA_1819 (rpoA)
Transcription machinery [BR:
sgn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SGRA_1819 (rpoA)
DNA repair and recombination proteins [BR:
sgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SGRA_1819 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
RAD51D_N
Mg_chelatase_C
Motif
Other DBs
NCBI-ProteinID:
AFC24553
UniProt:
H6L0L7
LinkDB
All DBs
Position
complement(1839507..1840505)
Genome browser
AA seq
332 aa
AA seq
DB search
MSLLNFQKPDKILLQKADDFEGSFEFKPLEPGFGQTIGNSLRRILLSSLEGFAVSAVRIK
GAEHEFSTIEGVVEDVVDIVLNLKQLRLKYLLDDPDITSEKIYLSVSGKNQLLASDINEH
TNVFQVTNPDLVICNLDDEITFEMELTVTKGRGYVPAEENMPKDAPIGYIPIDAIYTPIK
NVHYSVSASRVGQHTDYEKLNIDIKTDGAIHPEQAIKEAAKILIQHLMLITDENIKFPDE
TDKEDNIVDEHILHMRKLLKTSLEDLDLSVRAYNCLKAAKINTLADLVQYETHELLKFRN
FGKKSLVEIEELLQDKSLTFGMDLSKYKLDEE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgctgaacttccaaaaacctgataaaattcttctccaaaaggccgacgacttc
gagggctcttttgagttcaaaccgctagaacccggctttggccaaactatcggtaactct
ctacgcagaattttactctcttctctcgaaggttttgccgtttctgccgtcagaattaaa
ggggccgaacacgaattctctactatcgaaggcgtggtcgaagatgttgtcgatatcgta
ctcaatctaaaacaacttcgcctgaagtaccttctagatgatcccgatatcacctctgag
aaaatttacctcagtgtgtctggaaaaaatcaacttctcgcctccgatatcaacgaacat
actaacgtcttccaagttactaaccccgatttggtgatctgtaacctcgatgacgaaatt
actttcgaaatggaacttaccgtaacgaagggccgtggatatgttcccgctgaggaaaat
atgcccaaagatgctcccatcggttatattccaatcgacgcaatttatacgcctatcaaa
aatgttcattattctgtatccgctagccgcgtaggccagcataccgattatgaaaaattg
aacatcgatatcaaaactgatggcgctatccacccagaacaagccatcaaagaagccgcc
aaaatccttatccaacacctgatgctcatcaccgatgagaatatcaagtttcccgatgaa
accgataaggaagacaatatcgtcgatgagcatattctgcacatgcgcaagttgctcaaa
acttctttggaagatctcgacctttctgtccgcgcctataactgcctcaaggccgccaaa
atcaataccttggccgacctcgtgcagtacgaaactcacgaacttctcaagttccgcaac
tttggtaaaaaatctctagtcgaaatcgaagagctgctccaagacaaaagccttactttt
ggtatggacctcagcaaatacaaactcgacgaagagtaa
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