Saprospira grandis: SGRA_2081
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Entry
SGRA_2081 CDS
T01764
Symbol
holB
Name
(GenBank) DNA polymerase III gamma/tau subunits-like protein
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
sgn
Saprospira grandis
Pathway
sgn03030
DNA replication
sgn03430
Mismatch repair
sgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SGRA_2081 (holB)
03430 Mismatch repair
SGRA_2081 (holB)
03440 Homologous recombination
SGRA_2081 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgn03032
]
SGRA_2081 (holB)
03400 DNA repair and recombination proteins [BR:
sgn03400
]
SGRA_2081 (holB)
Enzymes [BR:
sgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SGRA_2081 (holB)
DNA replication proteins [BR:
sgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SGRA_2081 (holB)
DNA repair and recombination proteins [BR:
sgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SGRA_2081 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
AFC24812
UniProt:
H6L2Q5
LinkDB
All DBs
Position
complement(2096340..2097497)
Genome browser
AA seq
385 aa
AA seq
DB search
MQFKDVLGQKAAIEQLKVSYEHERTAHAQIFVGPEGAGGLALALAYSQYLLCEKNESGIA
DACGQCNACKKVQRNIHPDLHFSYPNIDSKAVSSDHIKEWRKMLEEKGPYVNMNDWLFYL
GANNQRGNINKRECVDIVRKFSFTRVEGRFKILLLWMPEYLDKEGNRLLKLIEEPEPNTV
FLLVAERAELILNTILSRCQLLKLPALDDELIAEALVQEGVPTQTAKEVAYLSEGNYRKA
KQLASGQNQEEQQLGQAFAGWLRACYQGRGPMVYWVEQFVTGKHPKEGKKGSKTGRKEQL
LFLEYGLFFLRELSLLQAGFPPSGLRLSAQDQKAAQGLAKLLPLPAIDKLQQLFNDHLYF
IERNAHPKVLFLDLSIKIHRIFKPL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttaaggatgtattgggccagaaggccgctatagagcaactcaaagtttcttat
gaacatgagcgcaccgctcatgcccaaatttttgtgggaccagaaggggcgggtggcctg
gccctcgccctcgcctatagccaatacctcctttgcgagaaaaatgagtctggcattgcc
gatgcctgtgggcaatgtaatgcctgcaaaaaggtgcagagaaatattcatccagatctc
cacttttcttatcccaatattgatagtaaagccgtcagcagcgaccatattaaggaatgg
cgcaaaatgctagaagaaaaaggcccttatgtcaatatgaacgattggcttttttatttg
ggggccaataaccaaaggggcaatatcaataagcgggagtgtgtagatattgtgcgcaaa
tttagctttacccgggtagaaggccgctttaaaatccttttgctctggatgcccgaatat
ttggacaaggagggcaaccgcctgctcaaactcattgaagagcccgagcccaataccgtc
tttctcttagtggccgaacgagccgagcttattctcaacaccatcctctctcgctgccag
ttgctcaaactacccgccttagacgatgagctaattgccgaggccttggtccaagagggc
gttcctacacaaacggccaaagaggtagcctatctttcggagggcaactaccgaaaagcc
aaacagctggccagtggccaaaaccaagaagaacagcaactggggcaagcctttgcgggc
tggctccgcgcctgttatcagggccgcggccctatggtctattgggtagagcaatttgta
acgggcaagcaccccaaagagggcaaaaagggcagtaaaacaggccgtaaagagcagctg
ctctttttggaatacggcctatttttccttagagagctcagcctattgcaggcgggtttc
ccccctagtggtttgcgcctatcggcgcaggaccaaaaggcggcccagggcctagcaaaa
ttgcttcccttacctgctattgataagctgcaacagctctttaacgatcatctgtatttt
attgagcggaacgctcatcccaaggttctttttttggatctctccattaaaattcatcgc
atttttaagccactttag
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