Saprospira grandis: SGRA_2531
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Entry
SGRA_2531 CDS
T01764
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sgn
Saprospira grandis
Pathway
sgn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGRA_2531 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgn03019
]
SGRA_2531 (pnp)
03016 Transfer RNA biogenesis [BR:
sgn03016
]
SGRA_2531 (pnp)
Enzymes [BR:
sgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SGRA_2531 (pnp)
Messenger RNA biogenesis [BR:
sgn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SGRA_2531 (pnp)
Transfer RNA biogenesis [BR:
sgn03016
]
Prokaryotic type
tRNA degradation factors
SGRA_2531 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
RNase_II_C_S1
KH_Vigilin
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
AFC25259
UniProt:
H6L6L3
LinkDB
All DBs
Position
2576882..2579125
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AA seq
747 aa
AA seq
DB search
MGKQIPLSTSAVIAGKEFTLETGKLAALTDGSVVLRYGDTMLLATAVAAEEARPDQSFFP
LSVDYREKFASAGRIPGNFFRREARPSEYEILTSRLVDRAIRPLFPDHFLNETQIFIFLI
SADGETLPDAFAAFAASAALMVSDIPFAGPISEVRIARINGEFIVNPSRTELETADMEFI
IAGSMDNIVMVEGEADECQEEDLIEAIKVAHEAIKEQCKMQLELRQLKGVTENRPVAEKE
ENEELKAAVDSACREKLMDIAGNPSDKKARKNAFKALKEETKAALTEQFGEEAWGEMSHL
FSGYFDALKKECAREVVLSKQQRLDGRTPTEVRNIWCEVDYLPAPHGSALFTRGETQSLT
TVTLGSKMDEALIDTALSLHNDNFLLHYNFPPFSVNEVGRPRGTSRREVGHGHLARRSLA
RVMPKDYPYTVRIVSDILESNGSSSMATVCAGSLGLMDAGVPIRKPVSGIAMGLITDGKG
RSVVLTDILGDEDHLGDMDFKVTGTEDGICAVQMDIKIDGLDYELLRTALLQAREGRLHI
LGVMNETMSEAREDLKPQTPRMELIIIDADYIGAVIGSGGKVIQGLQKETNTVVTVNEED
GKGYVHISGDKPNVEKAAAFINGITTEPEVGEIYDAKIVKLMPYGAFIEFLPGREGLLHV
SELAWERIENVEEVLTEGEEIQVKLLEIDPRTGKFRLSRKVLLEKPEGYVERPPREKRDR
NDDRRGGGRGGDRGGRGGDRGGRNNRR
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaacaaatccctttgagcacctctgcagttattgcaggcaaggagttcacacta
gaaactggcaaacttgccgcccttaccgatggttcagttgtactgcgctacggtgacact
atgcttttggctactgccgtagctgctgaagaagcccgacctgatcagagcttttttcca
ctttcagtagattatcgcgaaaaatttgcttctgctggtcgtattcctggcaacttcttc
cgtagagaggcccgcccttcagaatatgaaattcttacttctcgtttggtagaccgtgct
atccgcccgctcttccccgaccacttcctcaacgagacgcaaatctttatcttcctcatc
tctgccgatggagaaaccctacccgacgcttttgcggcctttgctgcttctgctgccctt
atggtttctgatattccctttgctggacctatctcagaggtgcgcattgctcgtatcaat
ggcgagtttatcgtgaacccttctcgcacagagctagaaactgccgatatggagtttatc
attgcgggtagcatggataatattgttatggtagaaggggaagccgatgaatgccaagaa
gaggacctcatcgaggcgatcaaagtggcccatgaagccatcaaagagcaatgtaaaatg
cagctcgagcttcgccagctaaaaggcgtaactgaaaaccgccccgtagcggaaaaagaa
gaaaatgaagagcttaaagctgctgtagatagcgcttgccgtgaaaaactcatggatatt
gctggcaatccttctgataagaaggcccgcaaaaatgcgttcaaagcactaaaagaggaa
accaaagccgccctaacagaacagtttggcgaagaggcttggggcgaaatgtctcatctc
ttcagtggctactttgatgcccttaagaaagaatgcgctcgtgaggtggtcttgagcaag
caacaacgcttggatggccgtactcccacagaggtgcgtaacatctggtgtgaagtagat
tatctacctgctcctcacggttctgcccttttcactcgtggagaaactcaatcattgacc
actgtaactttggggtctaaaatggatgaggccttgattgatactgccctttctttgcat
aatgacaacttcttgttgcactacaactttcctcctttctctgtaaatgaggtgggacgt
ccaagaggaactagccgccgcgaagtaggccacggtcacttggctcgccgctctttggcc
cgtgtaatgcccaaagattatccttatactgtacgtattgtatcagacattctagagtct
aacggttcttcttctatggccaccgtttgcgcaggttctttgggccttatggatgctggt
gtacctatccgcaaacctgtttcaggtattgctatgggcttgattaccgacggtaaaggc
cgctctgttgttcttaccgacatccttggcgatgaggaccacttaggggatatggacttt
aaagtaacgggtactgaagatggtatctgtgccgtacaaatggatatcaaaattgacggt
ttggattatgagttgcttcgcacggctttgctacaagctcgtgagggacgactacacatc
cttggcgtaatgaatgagactatgtctgaagctcgtgaagacctcaagcctcaaacgcct
cgtatggagttgatcatcatcgatgccgattatattggtgccgtgattggttctggtggt
aaggttatccaagggctacagaaagagaccaacactgtagtgaccgtgaacgaagaagac
ggtaaaggctatgtacacatttctggcgataagcccaatgtagagaaagctgctgccttc
attaacggaattacgaccgagcccgaagtaggagaaatctatgatgcaaaaatcgttaaa
ttgatgccttatggtgcctttatcgagtttttgcctggtcgtgagggactccttcacgtt
tctgaattggcttgggagcgcattgaaaatgtagaagaagtattgacagaaggagaggag
atccaagtgaaactactcgagatcgatcctcgtactggaaaattccgcttgtctcgcaag
gtattgctcgaaaagcccgaaggctatgtagagcgtcctcctcgcgaaaagcgtgatcgc
aatgatgatcgtcgtggcggaggccgtggaggtgatcgtggtggtcgcggtggagaccgc
ggtggccgaaataatcgccgctag
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