Saprospira grandis: SGRA_2931
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Entry
SGRA_2931 CDS
T01764
Symbol
deaD
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sgn
Saprospira grandis
Pathway
sgn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGRA_2931 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgn03019
]
SGRA_2931 (deaD)
03009 Ribosome biogenesis [BR:
sgn03009
]
SGRA_2931 (deaD)
Enzymes [BR:
sgn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SGRA_2931 (deaD)
Messenger RNA biogenesis [BR:
sgn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SGRA_2931 (deaD)
Ribosome biogenesis [BR:
sgn03009
]
Prokaryotic type
rRNA helicases
SGRA_2931 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_RecD
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFC25659
UniProt:
H6LAR6
LinkDB
All DBs
Position
3015870..3017294
Genome browser
AA seq
474 aa
AA seq
DB search
MGFENPSEIQHEAIPELLEQERDFLGLAQTGTGKTAAFGLPLIERMDSQMPLTQALILAP
TRELGQQIAKQLALFGKYQQRINMLAVYGGAPIVKQLKALRSAPQHIIIATPGRLIDLLK
RGAVDLRGLRYLVLDEADEMLNMGFKEDLDEILEYTAEGKNLWLFSATMSKDIKGIVKRY
MTNPLEVQLNSKQEVNENIEHQYVGLHYKDKSEALGRFLDAQPDMRAVVFCRTRRNTQEL
AELLIQRGYTADALHGDLSQAQRDQVMRRFRQHSLQVLIATDIAARGIDVDDLTHVFHYH
LPDDLSYYTHRSGRTARAGKKGLSIAFVEKRDFHRLRHIEKMLGLKIKQVQVPSAELIRN
ERLKTWCKNVLDQSIRANLTEEMKEEANLLFANLSKEELIGKVLAHELSKIQLGKMGAPQ
SFSEKGGGDRGRSGRKDGRRGGYKGKKKSGGYGKGRPNDRFSSFKKKKKKRGKY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgagaatcctagtgaaattcaacatgaagctattccagaactactagagcag
gaacgcgactttttgggcttggcccaaacgggaaccggaaaaactgctgcctttggtctg
ccgctcatcgagcgcatggatagccaaatgcccctgacacaggcattaatcttagctcct
actcgtgagttgggccaacagattgccaaacaattagcgcttttcggaaaataccagcag
cgaattaatatgcttgccgtttatggtggtgctcccatcgttaaacaactcaaagccctc
cgctcggcccctcagcatattattattgctacgcctggccgcttgatcgatttactcaaa
cgtggcgctgtagaccttagaggtttgcgctatttggtcctcgatgaagccgatgagatg
ctcaatatgggcttcaaagaagatctagacgaaattctagaatataccgccgaaggtaaa
aacctttggttgttctctgccaccatgtctaaagatattaagggcatcgtaaaacgctat
atgaccaaccccctagaggtgcagctcaatagcaagcaagaggtcaatgaaaatatcgaa
caccaatatgtaggcctacactataaggataagtcagaggctttgggccgtttcctagac
gctcaacccgatatgcgggccgtggttttctgccgcactcgtcgcaatactcaggaattg
gccgagctcttaatccaaagaggctatactgccgatgctttgcatggcgatttgtcgcaa
gcgcagcgcgaccaagtgatgcgccgcttccgccaacatagtttgcaggtgcttatcgct
accgatatcgccgcccgtggtatcgatgtggatgatctaacgcatgttttccactaccat
ttgcccgatgacctttcttattatacgcaccgaagtggccgtaccgctcgtgcgggtaaa
aaaggcttgtcgatcgcttttgtagaaaaacgcgatttccaccgtcttcgccatatcgaa
aagatgttgggcctcaaaattaagcaagtgcaggtgccttctgcggagctgatccgcaac
gaacgcctcaaaacttggtgcaaaaatgttttggaccaatctatccgagccaaccttacc
gaggaaatgaaggaagaagctaatctgctttttgccaacctcagcaaagaagagctcatc
ggaaaggtcctcgctcatgagttgagcaaaatccaactcggcaaaatgggcgcccctcag
tctttctctgaaaaaggtggaggagaccgtggccgctctggccgcaaagatggtcgccgt
ggtggctataaaggcaagaaaaaaagtggtggttacggcaaaggccgtcccaatgatcgc
tttagtagcttcaagaaaaagaagaagaaaagaggcaagtactag
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