Saprospira grandis: SGRA_3136
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Entry
SGRA_3136 CDS
T01764
Name
(GenBank) 3'-5' exonuclease
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sgn
Saprospira grandis
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgn03016
]
SGRA_3136
Enzymes [BR:
sgn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SGRA_3136
Transfer RNA biogenesis [BR:
sgn03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SGRA_3136
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFC25864
UniProt:
H6KZT8
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All DBs
Position
complement(3230127..3230711)
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AA seq
194 aa
AA seq
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MQYPVKISKAEVNELPLWHFEGEIITIETEEQLEEALLALNQCKILGFDTESKPSFRKGE
YHPVSLIQLAMPDKVFLIRNLKSGFSDGLKALFENPKIVKAGPALRDDIRDLQRLRPFKA
KGFKDIADIAKANGIQQMGARNLTAIFLGKRISKSQQTSNWEREPLSQAQNFYAATDAYL
GLKIYTLFQKLGWT
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgcaataccccgtcaagatctctaaagcagaggtcaacgaactccccctctggcatttt
gagggcgaaattattaccatagaaaccgaagagcagctagaagaggcccttttggccctc
aatcaatgcaaaattttgggctttgataccgagagtaaaccctcttttcgcaagggcgaa
tatcatcccgtttcgctcatccaattggccatgcccgataaggtttttctgattcgcaac
ctcaaatctggctttagcgatggcctcaaggccctcttcgagaaccccaaaattgtcaag
gcaggccccgctctccgagacgacatccgtgatttgcagcggctgcggccctttaaagcc
aagggctttaaggacattgccgatattgccaaggccaacggcattcagcaaatgggggcc
cgcaatcttacggcgatttttctgggcaaacggatttcgaaatcccaacagacctcgaac
tgggagcgagagcccctcagccaagcccaaaacttttatgccgccacagatgcctatttg
ggcctaaaaatttataccttattccagaaattgggctggacctaa
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