Saprospira grandis: SGRA_3166
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Entry
SGRA_3166 CDS
T01764
Name
(GenBank) fibronectin type III domain protein
KO
K20276
large repetitive protein
Organism
sgn
Saprospira grandis
Pathway
sgn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sgn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SGRA_3166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucodextran_B
Big_7
Cadherin-like
Motif
Other DBs
NCBI-ProteinID:
AFC25894
UniProt:
H6L0T8
LinkDB
All DBs
Position
complement(3262290..3267149)
Genome browser
AA seq
1619 aa
AA seq
DB search
MRSFIYSVLVLLLSLGSLGQLQAQESDGYGGHWFLGGGGGVAWQQSDACTQLGGGWTIYL
GKNIYYSPSRPLSLDLRMRYMGTVTYGQDDQLTDISNNSLLNGQSNSLFDPDYSLSNGGS
NFVYHNHRTAFNDLSLEARINFENLRRNHNIWLSLYGGIGLGWYRVAYDQLDQRVFLDDE
YINLYNSVAGDSTLSSSEIVDQLVGGRDGDYETFTNEFGDYDVIFTPSVGFELGYWVTPR
FAIGFGHRVNWTLTDNFDGIVRDGNNEIHHFSNFFIHGRLTDHHEEEVKPLPDPQAAPPQ
VSFTNPSGSSARTNNSSYTVRATVRNVRSASDIRFIQNGQVINNFSYSNGTFQVTIRLQQ
GANNINIRANNPSGTDQDVATINYEPIIRQDPPPSVVITTPSANPYTTSSSSASVRATIR
NVNSSNNVSCTLNGQSVNNFSFSGSSFSLSNISLQNGSNTVVVSASNNAGQASDQTVIIY
KQPVNTNNPNPPTVNITSPSSNPYNSSSSSASVRATIRNVRSSSNISFTVNGQVIRNFSF
SGTSFVASNINLQQGSNNIVITASNSDGNGSDQTSIIYQPVRNATPPTVNITTPSANPYN
SSNNNATIRASIRNVRTSRDISFTVNGQASSSFSFSGTSFVATGINLQQGNNFIVISASN
QDGNASDQTTIIYQPQRTPTPPTVNITSPSADPYTASTNRAMIRATIRNVNNSNAVQMQV
NGQTIRNFSFAGTNFVATNVNLQQGNNVVVISASNPDGTASDQTTIIYKPQRNPNPPTVS
ITSPSADPYTSSASQTSIRATIRNVNNSNDVQMQVNGQTIRRFSLSGSSFSANNVSLQQG
SNVVVISASNQDGTASDQTTIIYKPQRVATPPTVDITTPSANPYNTPSNTTTIRARIQHV
DNNRAVSFKVNGQTVRNFSFSGTSFVANNVRLQQGNNTIVVSASNQDGNASDQTTIIYKP
QRVPTPPTVNITTPSADPYTTTSNSTTVKASIQHVGSSSNVRFTVNGQTVRNFSFSGSSF
VANNVRLQQGNNTIVISANNQDGNASDQTVVIFKPQRISTPPTVKITTPSTDPYNSPNTN
TRIVATTSNISRKSEISFSLNNQNVSNFSFANNRITASVNLKQGSNQISIKVRNQDGSAS
DQTVIIYKPAPAPTVRITSPSADPHTVAQNKVDIQADVFNVNSANDIRFTVNGQTNRNFR
FSNNKFTAPNIRLNTGNNTVVVSASNAQGNASDQTVVIYQPAPQPPTVDITTPSSNPYTA
ASNSATIRATIRNVSSSSNVSFLVNGRAVSNFSFSGTSFSATNVPLRQGNNSISISGQNS
AGTASDAVTLIYKPAPTPDVRNLNVIISPNLNKCFAAVSAEVLNVSSKNEVSFQVNGRRV
SDFTLAGSRLNARVDVSNLGSGAITFTVSAQTAGGNDSENKRASLADCSLNVSGGNSSTI
GGNNNTKDPRNSGGNNGANSRPKPSVTFTSPRLGTSSVRTVNVRATITNVDNRSQVRFKL
NGQNMSNFQLSGINFQANNVGLRPGSNLLEITATNNNGSTTQTFAITYNAGGGTSNTADR
KADNNNQNSSTNSGSTVNDKKQSNKRTKTSTKDQKRRGSTTKTEEEKEEEAKTQKRRGN
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgcgatcatttatttattcagtattagtgcttctgctctctttggggagtttggggcag
ctacaggctcaggagagcgatggctatggcggtcattggtttttgggcggtggtggaggt
gttgcttggcagcagagcgacgcttgcacgcaactgggaggtggttggaccatctaccta
ggaaagaacatttattacagtccgagtaggcccttatctttagatttgcggatgcgttat
atggggaccgtgacctatgggcaggacgatcagttgaccgatatcagcaacaacagtttg
ttgaatgggcagtctaattctttgtttgaccctgattactcgctgagtaatggagggagc
aactttgtgtaccacaaccaccgcaccgcctttaatgatttgtcattggaagcgagaatc
aactttgagaacctacgtcggaatcacaacatctggttatcgctttatggtggaattgga
ttgggttggtatcgggtagcttatgatcagttggaccagcgtgtttttttggatgatgag
tacatcaacctttataatagtgtagcgggagactcgaccttaagttcttctgagattgtg
gaccagcttgtggggggccgtgatggcgactatgagacctttaccaatgaatttggtgat
tatgacgtcatctttacgccttctgttggttttgagttgggctattgggtaacgccacgt
tttgctattggttttgggcatcgagtgaactggaccttaacggacaactttgacgggatt
gttcgggatggcaacaatgagattcatcatttttccaacttctttattcatggtcgtttg
acggaccatcatgaggaggaagtaaagcctttgccagatcctcaggcagcgcctccgcag
gtaagttttacgaacccttcgggcagttcggccaggaccaacaatagtagctatacggta
cgggcgaccgttcggaacgtgcgttcggccagtgatattcgttttattcagaatgggcag
gtgattaacaactttagctatagcaatgggacttttcaagtaacgattcgattgcagcag
ggagccaacaacatcaacattcgggcaaacaacccctctggaaccgaccaagatgtggcc
actattaactacgagcccattattcgtcaggatcctccccccagcgtagtcattacgact
ccctcggccaatccttataccacaagcagcagttctgctagtgtaagagcgaccattcgc
aacgtaaacagcagcaacaatgtaagttgtacgctaaacggtcaatcggttaataacttt
agctttagtggaagcagctttagcttgagcaatatttctttgcaaaatggcagcaacacg
gtagtcgtatcggctagtaataatgcggggcaggcctctgaccaaaccgtcattatttat
aagcagccagtaaacaccaacaaccccaatccccctacggtaaacattacgagtccttct
tctaatccctataacagctcgagcagcagtgcgagcgttcgtgcgactattcgcaatgtt
cggagcagcagcaacatcagtttcaccgtaaatggtcaggtaattcgcaactttagtttt
agtggaactagctttgtggcgagcaacatcaacttgcagcaaggaagcaataacattgtc
attacagctagcaacagcgatggaaatggttcggatcagacgagcattatctaccagccg
gtgcgcaatgctacacctcccacagtaaacattacgacaccttcggccaatccatacaac
agcagtaataataatgcgaccattcgggcgagcattcgcaatgtacgcactagccgcgac
atcagctttaccgtaaacggtcaggcctctagtagctttagctttagcggaactagcttt
gtggccacgggcatcaacctacagcagggcaataactttattgttatttcggccagcaac
caagatggtaatgcttcggatcagacgacgattatttatcagccgcaacgtacccccaca
cctcccacggtaaacatcactagcccctctgcagatccttatacggcttctactaatcgg
gccatgattagagctacaattcgcaatgtgaataatagcaatgccgtgcaaatgcaggta
aatgggcaaacgattcgcaactttagctttgcggggaccaactttgtggcgaccaatgtg
aatctacagcaaggtaataatgtagtggtgatttcggctagcaacccagatggtacagct
tcagaccaaaccacgattatctacaagccacagcgcaaccccaatccacctacagtaagt
attacaagtccttctgcagatccttatacctctagtgctagtcaaacaagcatccgcgca
accattcgcaatgtgaataacagcaatgatgtgcaaatgcaggtaaatgggcaaacaatt
cgtcgatttagcctcagcggcagcagctttagcgccaataatgtttcgctacaacagggg
agtaatgtagtcgtgatttcggccagcaaccaagatggtactgcttcggaccaaaccacc
attatctacaagccgcagcgcgtagctacaccacctacagtagatattactacgccctcg
gccaatccttataacacgccgagcaataccacgacaattagagccagaattcagcatgta
gataacaaccgtgcggttagctttaaggtaaacggacaaaccgttcgcaactttagcttt
agcggaactagctttgtcgctaataatgtccgcctacaacaaggtaataatacgattgtc
gtttcggctagcaaccaagatggtaatgcttcggaccaaacgacgattatttacaagccg
cagcgagttcccactccccctacggtcaatattacaacgccttcagctgatccttataca
actacaagcaacagcacaacagtaaaagctagcatccagcatgtaggcagtagcagtaat
gttcgctttacggtaaacggacaaaccgttcgcaactttagctttagcggaagcagcttt
gtcgctaataatgtccgcctacaacaaggtaataataccattgtcatttcggccaataac
caagatggcaatgcttcggaccaaactgtagtgatctttaaaccacagcgtatttctact
ccacccacagtgaagattactacgccttcgacagatccttacaacagcccgaataccaat
actcgtatcgttgctacaactagcaatattagccgcaaatcagaaattagctttagcctg
aataatcagaatgtgtctaattttagctttgccaataatagaattaccgcttcggtaaat
cttaagcaaggaagcaatcaaattagtatcaaggtgcgcaaccaagatggtagcgccagc
gaccaaaccgtgattatctacaagccagcacctgcacctacagtgagaattacttctcct
tctgcagatccacatacagtggcccaaaacaaagtcgatattcaagccgatgtctttaat
gtcaattcagccaatgatatccgctttacagtgaatggccaaaccaaccgcaacttccgc
tttagcaacaataagtttaccgcccccaatatccgattgaatacgggcaataataccgtt
gtcgttagcgcaagcaatgcgcaaggcaacgcctctgaccaaaccgtggtgatctatcaa
cccgccccacaaccaccaacagtagatattactaccccctctagcaacccttatacggcc
gctagcaatagcgcgacaattcgggcgactatccgaaatgtaagtagcagtagtaatgtc
agcttcttggtgaatggtagagcagtgagtaactttagctttagtggaactagctttagc
gcaaccaatgtccccctacgccaaggcaataatagcattagcatttctggacaaaatagc
gcgggtaccgctagcgatgccgttaccctgatctataaacccgctccaactccagatgta
cgcaacctcaatgtaattattagccccaacctcaataagtgcttcgccgccgtttcggcc
gaggtccttaatgtgagcagcaaaaatgaagtgagcttccaagttaatggccgtagagtt
tctgactttaccctagccggtagccgcttgaacgcccgcgtagatgtaagcaatctaggc
tctggcgcaatcacttttaccgtttctgcacaaactgctggcggtaacgactccgaaaat
aaacgcgctagcctagccgattgctctctcaatgtttctggcggaaactctagcaccatc
ggcggaaataacaataccaaggaccctcgaaattcaggaggaaataatggcgccaatagc
cgccccaaaccttctgttacctttactagccctcgccttggaacgagctcggtccgtacc
gtcaatgttcgcgctaccatcacgaatgtagacaaccgtagccaagttcgctttaagctc
aacggccagaatatgtcgaacttccaactttcaggcatcaatttccaagctaataatgtt
ggcctgcgcccaggtagcaacttgctcgaaattaccgccacaaacaataacggaagtacc
acacaaacctttgccattacttataatgccggaggaggaacaagcaataccgccgaccgc
aaagctgataataataaccaaaatagctctaccaatagtggatctacggtaaacgataaa
aagcaaagcaataagcggacaaaaacctcgactaaagaccaaaaacgtcgtggaagtact
actaaaacagaggaagaaaaggaagaagaagccaaaacgcaaaaacgtcgaggtaactaa
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