Streptococcus gordonii: SGO_0254
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Entry
SGO_0254 CDS
T00594
Name
(GenBank) helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sgo
Streptococcus gordonii
Pathway
sgo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SGO_0254
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgo03400
]
SGO_0254
Enzymes [BR:
sgo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SGO_0254
DNA repair and recombination proteins [BR:
sgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SGO_0254
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
AAA_11
UvrD-helicase
DEAD
AAA_22
PhoH
nSTAND3
Herpes_Helicase
AAA_25
UvrD_C
5_3_exonuc
NACHT
NPHP3_N
SLFN-g3_helicase
AAA_7
AAA_28
FtsK_SpoIIIE
AAA_12
AAA
RsgA_GTPase
Phage_Treg
NTPase_1
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ABV09553
UniProt:
A8AUW3
LinkDB
All DBs
Position
complement(271661..274027)
Genome browser
AA seq
788 aa
AA seq
DB search
MEFYFSGTVERIIFENPNNFFRILLLDIEDTDAEFDDFEIIVTGTMADIMEGQDYTFWGT
LVQHPKYGEQLKVTRYERAKPTSKGLVKYFASDHFKGIGVKTAQKIIDLYGDNTIDQILA
DPSRLVSINGLSAVNREAFVSKLRQNYGTEMLLSKLAEYGIPNKLALQIQDTYKEETLEI
VQKYPYQLVEEIQGIGFKIADQLAQQLGIESDAPERFRAGLVHTLFSQSMETGDTYIEAR
DLLAHTIDLLENARQVELDPALVADELAHLIEEDKIQNVDTKIFENSLYFAEEGIRSNLI
RILEKGKKETFGAPKLESIIEQVEQDLGICYDHIQKKAICDAINHKVFILTGGPGTGKTT
VINGIIATYATLHKLDLAKKQELPILLAAPTGRAARRMNELTGLPSATIHRHLGMTGDDD
TSHLDDYLDADFIIVDEFSMVDTWLANQLLSNISSNSKILIVGDADQLPSVSPGQVLADL
LKIRLLPQTKLTKIYRQGEDSTIVTLASQIQQGLLPANFTEKKADRSYFEASSEYIPDMI
KKIVAAAIRSGIPAQDVQVLAPMYRGPAGIDQINQLMQDLINPSEKDQLVFEAPDCQYRQ
GDKVIHLVNDAESNVFNGDLGYITDLLPAKYTDSKQDELTINFAGNEIVYQRSEWYKIRL
AYAMSIHKSQGSEFPVVILPITKSSHRMLQRNLIYTAITRSKSKLVLLGEFSAFHYAVKN
TGTARKTYLVERFADLLEREEPAEVVTTNSDTDDPIPEDGFILTLDNYLSIDPMIGIREE
DIKDIFKK
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggaattctatttttcaggaaccgtcgaacgcattatatttgaaaatcccaacaatttc
tttcgaattttgttactggatatcgaggacacagatgcagaatttgatgattttgagatc
attgtgaccggaaccatggccgatatcatggaaggacaagactataccttttggggaact
cttgtccagcatcccaaatacggggaacagctaaaagtaactcgctacgaaagagcaaag
ccaactagtaagggcctggtcaagtattttgctagcgatcattttaaagggatcggtgtt
aagaccgcccaaaagataatagacctctatggagataatacgattgaccagatcttagct
gatcctagccggctcgtaagtattaatggcctttctgcagtcaatcgggaggccttcgtc
agcaaacttagacaaaattacggcacagagatgttgctctctaaactcgctgaatatggc
atccccaataaacttgccttgcagattcaagatacctacaaagaagaaacgctagaaatt
gtccaaaaatatccttatcaactagttgaagaaattcaaggtattggtttcaaaatagct
gaccagttggcccagcaacttggtattgaaagcgatgctccagagcgtttccgagctggt
cttgttcatacccttttcagccaatctatggagacaggtgatacttatatagaagcacgt
gacttgctagcccacaccattgatttgctggagaatgcccgtcaggttgaacttgatcct
gccttggtagcggatgagttggcccacctcattgaagaagataagattcaaaacgttgat
acaaaaatctttgaaaacagtctttatttcgccgaagaaggtatccgtagcaatctgatt
cggattctagaaaaaggcaaaaaagaaacctttggtgccccaaaactcgaaagtatcatc
gaacaagtcgagcaagacttagggatctgctatgaccatattcaaaagaaggccatctgc
gatgccattaatcataaggtgtttattctgacgggtgggccaggaactggtaaaacaact
gttatcaacggcattattgctacttatgccactcttcacaagctagatttagctaaaaaa
caggaattacctattctgcttgctgctccgactggacgcgctgccaggcgaatgaatgaa
ttaactggactccccagtgctactattcaccggcatctagggatgactggagatgacgat
accagccatttagatgactatttggatgctgatttcatcattgtggatgagttctctatg
gtcgatacttggctggccaatcaactactcagcaatatttcttccaacagcaagattctc
attgtgggggatgctgaccaacttccgtctgtcagtcccggtcaggttctggctgatctt
ttaaaaatacgtcttttaccccaaactaaactgacaaaaatctaccggcaaggagaagat
tcaacaattgttaccctggccagtcaaatccaacaaggacttctgccggctaattttact
gaaaaaaaggcggatcgatcctatttcgaagcgtctagcgagtatatccctgacatgatt
aagaaaatcgtagccgccgccattcgcagtggcatccctgcccaggacgtccaagtcttg
gcccctatgtatcgaggacccgcgggaatcgaccaaatcaaccaacttatgcaggatttg
ataaatccatcagaaaaagaccaactggtctttgaagcaccagactgccagtaccggcaa
ggagacaaggtcatccacctggtcaatgatgctgaaagcaatgtgtttaatggggacttg
ggctatatcacggacttgttgccagcaaaatacaccgactctaaacaagatgaactaacc
atcaacttcgctggaaatgaaatcgtctatcaacgtagcgaatggtacaagattcgcctg
gcctatgccatgagtattcataaatcacaaggtagtgaatttcctgtcgtgattctgcca
atcaccaagagtagccaccggatgttgcaacgcaacctcatctatacagctattactcgc
tcaaaaagcaagctcgttcttttaggagaattttctgcctttcactatgctgtaaaaaat
acgggcacagcccgcaaaacttatctggtcgagcgttttgctgatcttttagaaagagaa
gagcctgctgaagttgtcaccactaattctgacacagacgatccaattcctgaagatggt
tttatccttactcttgataactacctcagtattgatcccatgattggaattagagaagag
gatattaaagatatttttaaaaaatag
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