Streptococcus gordonii: SGO_0344
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Entry
SGO_0344 CDS
T00594
Symbol
pnpA
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sgo
Streptococcus gordonii
Pathway
sgo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sgo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SGO_0344 (pnpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sgo03019
]
SGO_0344 (pnpA)
03016 Transfer RNA biogenesis [BR:
sgo03016
]
SGO_0344 (pnpA)
Enzymes [BR:
sgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SGO_0344 (pnpA)
Messenger RNA biogenesis [BR:
sgo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SGO_0344 (pnpA)
Transfer RNA biogenesis [BR:
sgo03016
]
Prokaryotic type
tRNA degradation factors
SGO_0344 (pnpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
SPATA25
PCB_OB
DUF4404
Motif
Other DBs
NCBI-ProteinID:
ABV10418
UniProt:
A8AV53
LinkDB
All DBs
Position
376196..378382
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AA seq
728 aa
AA seq
DB search
MTKQVFKTVFAGRELVVETGQVAKQANGSAVVRYGESTVLTAATMSKKMATGDFFPLQVN
YEEKMYAAGKYPGGFNKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
DASPQMAAMFGSSLALSISDIPFNGPIAGVQVGYVDGEFIINPSKEQKEVSLLELTVAGT
KDAINMVESGAKELSEDVMLEALLKGHQAVKELIAFQEEIVAAVGKEKAEVELLHVDEEL
QAEIVAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLDAEVDYLPRVHGSGLFTRGQTQALSVLTLA
PMGETQIVDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALEQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGNNYTV
LTDIQGLEDHFGDMDFKVAGTREGITALQMDIKIEGITAEILTEALDQAKKARFEILDLI
EATIPAPRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQDAINRAKEIIAGLVREAKVDEVYHAKVVRIEKFGAFVNLFDKTDALVHISELAWT
RTNNVEDVVQIGDEVDVMVIKIDAKGRVDASMKALLPRPPKPEKSDKHHDKGHPHKKHEE
APLTQTEE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaacaagtttttaaaaccgtttttgcaggccgtgagttggtagttgaaaccggt
caggttgcaaagcaggcaaatggcagcgccgttgttcgatatggagaaagtaccgtttta
actgcggcaactatgtccaaaaagatggctactggtgactttttcccattgcaggtcaac
tatgaggaaaaaatgtatgcagctgggaaataccctggtggctttaacaagcgtgaaggc
cgtccgtcaacagatgcgactttgacagcccgcttgattgatcgtccaattcgccctatg
tttgcggaaggcttccgcaatgaagttcaggttatcaatactgttctttcttatgacgaa
gatgcttcgcctcaaatggccgctatgtttggtagctctttggctctctctatctcagat
attccttttaatggccctattgcaggagttcaagtcggctatgtagatggtgaattcatc
atcaatcctagcaaggagcaaaaagaagtttcacttttggaactgacagtagctggtacc
aaagatgctatcaacatggtagagtctggagccaaggaactgtctgaagatgtcatgctg
gaagctcttctcaaagggcaccaagcggtcaaagaattgattgccttccaagaagaaatt
gtcgcagcagtcggcaaggaaaaagcagaagtagaattgctgcatgttgatgaagagttg
caggcagagattgtcgcagcctataacagcgacttgcaaaaggctgttcaggtagaagaa
aagctggcgcgtgaagccgcaactcaggctgtcaaagaccaagtcacagcagtttatgaa
gagaaatacgcggaccacgaagaattcgaccgtatcatgcgcgatgtggctgaaatcttg
gagcaaatggagcatgcagaagtgcgtcgtttaattaccgaagataaggtccgtcctgac
ggtcgtaaggttgatgaaatccgtccgttggatgcggaagtggattacctgccgcgcgtg
catggctctggtctctttactcgtgggcaaacccaggccttgtctgttctgaccttggcg
ccaatgggggaaacacaaatcgttgacggcttggatccagaatacaagaaacgcttcatg
caccactataatttcccgcaatattctgtcggtgagacaggccgttatggggctcctggc
cgtcgtgaaattggacacggtgcccttggggaacgtgctttggagcaagtcttgcctagc
ttggaagagtttccttacgcgattcgtctagtagcagaagtcttggagtccaacggttct
tcctcccaagcatctatctgtgcgggcactttggctctgatggcaggtggtgtgccgatt
aaggcgccagtagcagggattgccatgggtctcatctcagatggaaataactacacagta
ttgaccgatatccaaggtttggaagaccactttggagacatggacttcaaggttgcaggt
actcgcgaagggattacagctctccaaatggatatcaagattgaaggaattacagcggaa
atcctgacagaagctcttgatcaggctaagaaagcccgctttgaaattctggacttgatt
gaagcgacgattccagctccgcgtcctgagttggctccaactgctccgaaaatcgacacc
atcaagattgatgtggataagattaagattgtcatcggaaaaggtggggaaaccattgat
aagattatcgctgagaccggtgttaagattgacattgatgaagaaggaaatgtgtccatc
tactctagcgaccaagacgcgattaatcgtgccaaggaaatcattgctggcttggtccgc
gaagcaaaagtggatgaagtttaccatgccaaggttgttcggattgagaaatttggtgct
tttgtcaatctctttgacaagacagatgcactggttcacatttcagagctagcttggact
aggactaacaacgtcgaagatgtcgtacaaatcggtgatgaagtagatgtcatggttatc
aagattgatgccaaaggccgggtagatgcttccatgaaagcacttttgccacgtccgcct
aaacctgaaaaatcagataagcatcatgataaggggcatcctcataagaaacatgaagaa
gcacctcttactcaaacagaagaataa
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