Streptococcus gordonii: SGO_1197
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Entry
SGO_1197 CDS
T00594
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sgo
Streptococcus gordonii
Brite
KEGG Orthology (KO) [BR:
sgo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgo03032
]
SGO_1197 (topA)
03400 DNA repair and recombination proteins [BR:
sgo03400
]
SGO_1197 (topA)
Enzymes [BR:
sgo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
SGO_1197 (topA)
DNA replication proteins [BR:
sgo03032
]
Prokaryotic type
DNA Topoisomerases
SGO_1197 (topA)
DNA repair and recombination proteins [BR:
sgo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SGO_1197 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ABV10348
UniProt:
A8AXH4
LinkDB
All DBs
Position
complement(1246933..1249026)
Genome browser
AA seq
697 aa
AA seq
DB search
MYKLVTKTSKKSTTKKNLVIVESPAKAKTIEKYLGRNYKVLASVGHIRDLKKSTMSIDFE
NNYEPQYINIRGKGPLINDLRKEAKKAKQVFLASDPDREGEAISWHLAHILNLDEKEKNR
VVFNEITKDAVKNAFKEPRQINMDLVDAQQARRVLDRLVGYSISPILWKKVKKGLSAGRV
QSVALKLIIDRENEINAFKPEEYWTIDSTFKKGSRQFQASFYGINGRKMKLTNNDEVKEV
LSLLKGDDFKVESVERKERRRNAPLPYTTSSMQQDAANKINFRTRKTMMVAQQLYEGINI
GSGVQGLITYMRTDSTRISPVAQNEAANYITDRFGAKYSKHGSKIKNASGAQDAHEAIRP
SSVFNTPESIAKYLDKDQLKLYTLIWNRFVASQMTAAVFDTMNVKIEQNGVQFTANGSQV
KFDGYLAIYNDSDKNKMLPDMEKGDTVKRVNTNPEQHFTQPPARYSEATLIKTLEENGVG
RPSTYAPTIETIQKRYYVKLVSKRFEPTELGEIVNSLIVEFFPGIVNVKFTAEMEAKLDD
VEVGKEQWQKVIDEFYRPFEKEVAKAESEMEKIQIKDEPAGFDCEVCGSPMVIKLGRFGK
FYACSNFPDCRHTQAIVKEIGVTCPQCQKGHVIERKTKRNRIFYGCNRYPDCDFTSWDKP
VGRNCPKCDHYLVEKKVRGGGKQVVCSNGDYEEEKVK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
gtgtataaattggtaacaaaaacaagtaaaaagtccacaaccaagaaaaatctggttatc
gtggagtcgcctgccaaggcaaaaacaatagaaaaatacctgggaaggaactataaagtt
ttagccagtgttgggcatattcgtgatttgaaaaagtcaacaatgtccattgattttgaa
aataattatgaaccacaatatatcaatatccgaggcaagggaccactcatcaatgattta
aggaaagaagcaaaaaaagctaaacaagtctttctggcaagtgacccggaccgagaagga
gaggctatttcatggcatttggcgcatattcttaacttggatgaaaaagaaaagaatcgt
gtggtttttaacgaaattactaaagatgcagtcaagaatgcttttaaagagcctcgtcag
attaatatggatttggtcgatgcccaacaagctcgtcgtgttctagaccgtttagttggt
tattctatttctcctattctttggaagaaagtcaagaaaggtttgtcagctggtcgggtt
cagtctgttgctctcaaattaattattgaccgggaaaatgaaataaatgctttcaagcct
gaagagtattggaccattgactctacctttaaaaaaggaagtcgacaatttcaagctagt
ttttatggcataaatggccgaaaaatgaaactgaccaataacgatgaagtgaaagaggtt
ctttcccttcttaagggagatgactttaaggttgaaagcgttgaaagaaaagaacgtcgg
cgtaatgctcccttaccgtatacgacttcttctatgcaacaggatgcggctaataagatc
aatttccggactcgtaagactatgatggtagctcagcaactctatgaaggcatcaacatc
ggttctggagttcaaggtcttattacttatatgcgtacggattcgactcgtattagtcca
gttgctcaaaatgaagctgctaattacattactgatcgttttggagctaagtattcaaaa
cacggcagtaagattaaaaatgcttccggagctcaagatgcccacgaagctattcgacct
tcgagtgtctttaatacaccagaaagtattgcgaagtatctggataaagatcagctgaag
ctctatacactgatctggaaccgctttgtagccagtcaaatgacagctgcagtctttgat
actatgaatgttaaaattgagcaaaatggtgttcaatttacggccaatggaagtcaggtc
aagtttgatggttatctagctatttataatgactctgataaaaataaaatgcttccagat
atggaaaagggtgatactgtcaaacgtgtcaatactaatccagaacagcactttactcag
ccacctgctcgctattctgaagctactcttatcaagactctcgaagaaaatggagttggc
cggccgtctacttacgcaccgaccattgagaccattcaaaagcgttattatgttaaactg
gtttctaagcgttttgaaccaacagaacttggtgaaatcgtcaattctctaattgttgaa
tttttcccaggtatcgtaaatgtgaaatttactgctgagatggaagcaaaactggacgat
gtagaagtcggaaaagagcaatggcagaaggttattgacgagttttaccgacctttcgaa
aaagaagtagccaaagctgagtctgaaatggaaaaaatccaaatcaaggatgagccagct
ggtttcgactgcgaggtttgtggcagtccgatggtcatcaagttgggtagatttgggaaa
ttttatgcctgcagtaatttcccggattgtcgtcatactcaggctattgtcaaggaaatt
ggcgtgacctgcccgcagtgccaaaaaggccatgttattgaacgtaagactaagaggaat
cgtattttctacggctgtaatcgttatccagactgtgactttacatcttgggataagcca
gtcggacgaaactgtccaaaatgtgaccactatctggttgaaaagaaagtccgtggtggc
ggtaagcaggtagtttgtagcaatggtgattatgaagaagaaaaggtcaaataa
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