Streptococcus gordonii: SGO_1273
Help
Entry
SGO_1273 CDS
T00594
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
sgo
Streptococcus gordonii
Pathway
sgo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sgo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
SGO_1273 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgo03021
]
SGO_1273 (rpoD)
Transcription machinery [BR:
sgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SGO_1273 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
DprA_WH
DUF2316
DBD_HTH
Motif
Other DBs
NCBI-ProteinID:
ABV11024
UniProt:
A8AXP5
LinkDB
All DBs
Position
complement(1317036..1318148)
Genome browser
AA seq
370 aa
AA seq
DB search
MATKQKEVTTFDVQVAEFIRNHKKAGTVIDDEINDKLIIPFTLDADGIEDLLQRIQDAGI
SITDKEGNPSARVLHNEEEEAELTDEELLGSNSAKVNDPVRMYLKEIGVVPLLTNEEEQE
LAILVEQGDTEAKQRLAEANLRLVVSIAKRYVGRGMQFLDLIQEGNMGLMKAVDKFDYTK
GFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLVREQRNLLQELGQDPTPEQI
AERMDMTPDKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDEVIENPVDYTTRVVLREQ
LDEVLDTLTDREENVLRLRFGLDDGKMRTLEDVGKVFNVTRERIRQIEAKALRKLRHPSR
SKPLRDFIED
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggctacaaaacaaaaagaagtaacaacatttgacgtacaagttgcagaatttattcga
aaccataaaaaggctggtacggtaattgatgatgaaattaatgataaattgattattcct
tttaccttagatgcagatggtatcgaagatttgttgcaacgtattcaagatgcagggatt
tctattacagataaagaagggaatccaagtgcacgtgttttacacaacgaagaggaagaa
gcagagctaactgatgaagaacttttaggtagcaattcagctaaagtcaacgatcctgtt
cgtatgtatctgaaagaaattggagtcgttccacttttgacaaacgaagaagagcaagaa
ttggcaatcttggtagagcagggcgatactgaggctaagcaacgtttggctgaagccaac
cttcgcttggtagtttctattgctaaacgttatgttggacgtggcatgcagttccttgac
ttgatccaagaaggaaatatgggcttgatgaaggccgttgacaagtttgactataccaaa
ggatttaagttttcaacgtatgcaacttggtggatccgtcaggccattacccgtgcgatt
gctgaccaagctagaacaatccgaatcccagttcacatggtagaaacgattaataagcta
gttcgtgagcaacgcaatctcttgcaagaattaggccaagatccaacgcctgagcagatt
gctgagcgtatggatatgacaccagataaggttcgtgagattctcaagattgcccaggag
ccagtttctctggaaacacctatcggtgaggaagatgatagccatctgggtgactttatc
gaagacgaagtaattgaaaatccagttgattacacaactcgtgttgttcttcgtgagcag
ctggatgaagttttagacactcttacagatcgtgaagaaaatgttcttcgtctgcgtttt
ggtttggatgatggtaaaatgcggaccttggaagatgttggtaaagttttcaatgtgaca
cgtgaacgcattcgccaaattgaagctaaagctctacgtaaactacgccacccaagccgt
agcaagccactccgtgatttcattgaagattaa
DBGET
integrated database retrieval system
