Streptococcus gordonii: SGO_1926
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Entry
SGO_1926 CDS
T00594
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
sgo
Streptococcus gordonii
Pathway
sgo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sgo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SGO_1926 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgo03021
]
SGO_1926 (rpoC)
03400 DNA repair and recombination proteins [BR:
sgo03400
]
SGO_1926 (rpoC)
Enzymes [BR:
sgo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SGO_1926 (rpoC)
Transcription machinery [BR:
sgo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SGO_1926 (rpoC)
DNA repair and recombination proteins [BR:
sgo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SGO_1926 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF6076
Motif
Other DBs
NCBI-ProteinID:
ABV09586
UniProt:
A8AZI2
LinkDB
All DBs
Position
complement(1993372..1997019)
Genome browser
AA seq
1215 aa
AA seq
DB search
MVDVNRFKSMQITLASPNKVRSWSYGEVKKPETINYRTLKPEREGLFDEVIFGPTKDWEC
ACGKYKRIRYKGIICDRCGVEVTRAKVRRERMGHIELKAPVSHIWYFKGIPSRMGLTLDM
SPRALEEVIYFAAYVVIDPKDTPLEHKSIMTEREYRERLREYGAGSFVAKMGAEAIQDLL
KQVDLEAEIAVLKEELKTATGQKRVKAVRRLDVLDAFYKSGNKPEWMVLNILPVIPPDLR
PMVQLDGGRFAASDLNDLYRRVINRNNRLARLLELNAPGIIVQNEKRMLQEAVDALIDNG
RRGRPITGPGSRPLKSLSHMLKGKQGRFRQNLLGKRVDFSGRSVIAVGPTLKMYQCGVPR
EMAIELFKPFVMREIVARDIVQNVKAAKRLVERGDERIWDILEEVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGKALRLHPLVCEAYNADFDGDQMAIHVPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYLTMEEAGREGEGMVFKDMDEAVMALRNGYVHLHTRVGI
TTDSLAKPWTESQKHKILMTTVGKILFNAIMPEELPYLQEPTNANLTEGVPDKYFLESGK
DIKEAIQALELNVPFKKKNLGNIIAEIFKRFRTTETSALLDRLKNLGYHHSTLAGLTVGI
ADIPVVEDKAEIIEESHKRVEQITKQFRRGMITDDERYNAVTAEWRAAREKLEKRLVANQ
DPKNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGRIMELPILSNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGTDRGLLITSITDGKEMIEPLE
ERLVGRYTKKSIKHPETGEVLVPADVLVTEDMARQVVNAGVTEVTIRSVLTCNTRHGVCR
HCYGINLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASSSDITQGLPRVQEI
FEARNPKGEAVITEVKGEVTAIEEDASTRTKKVFVKGQTGEGEYVVPFTARMKVEVGDQV
SRGAALTEGSIQPKHLLAVRDVLSVETYLLAEVQKVYRSQGVEIGDKHIEVMVRQMIRKV
RVMDPGDTDLLMGTLMDITDFTDANRDVVISGGVPATARPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDHLLGLKENVIIGKIIPAGTGMARYRNLEPQAINEVEIIDEVV
VTPEDVESTETLVTE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
gtggttgatgtaaatcgttttaaaagtatgcaaatcaccctagcttctcccaataaggtc
cgttcatggtcttatggggaagtgaagaaacctgaaacaatcaattaccgcacacttaaa
ccagaacgcgaaggcctctttgacgaagttatttttggcccaaccaaggattgggaatgt
gcttgtggtaagtacaaacggattcgttacaagggaattatttgtgaccgctgtggtgtt
gaagtaacccgcgctaaagttcgtcgtgaacgtatggggcacatcgaattgaaggcacct
gtttcacatatttggtactttaaaggaattccaagccgcatgggactcactttggatatg
agtcctcgtgctttggaagaagtcatttattttgcggcttatgtggtcattgatcctaag
gatacaccgctagagcacaagtcaattatgactgaacgtgagtatcgtgaacgtttgcgt
gagtatggtgcaggctcatttgtagcgaaaatgggagcggaggctattcaagatctcttg
aaacaagtagatttggaagctgaaattgctgttctcaaagaagaattaaaaactgcgact
ggacaaaaacgtgtgaaggcagttcgtcgcttggacgttttggacgccttctacaagtct
ggtaataaaccagaatggatggttctcaatatcctgccagtcattccgccagatttgcgt
ccgatggttcagctggatggtggtcgttttgcggcttctgaccttaatgacctctatcgc
cgtgttatcaaccggaacaatcgtttggcgcgcttgcttgagttgaatgcacctggtatc
atcgtgcaaaatgagaagcgtatgcttcaagaagcggtagatgctttgattgataatggt
cgtcgtggtcgtccgatcacaggaccaggtagccgtccacttaaatcattgagccacatg
cttaaagggaaacaaggacgcttccgtcaaaacttgctgggtaaacgggttgacttctca
ggacgttctgttatcgccgttggaccaactctaaagatgtaccaatgtggtgtgccacgt
gaaatggcgattgagctctttaaaccatttgtgatgcgtgaaatcgttgctcgtgatatc
gtgcaaaacgtaaaagctgcaaaacgcttggtggaacgtggagatgagcgtatctgggat
atcctggaagaagtaatcaaggaacacccagtgctcttgaaccgcgcaccgacccttcac
cgtttgggaattcaggcttttgagccggttctgattgacggtaaggctcttcgcttgcac
ccactggtctgtgaagcctacaatgccgactttgacggtgaccaaatggccatccacgta
ccattgtctgaagaagcgcaggctgaagctcgtatcctcatgctagctgctgagcatatc
ttgaaccctaaagatggtaagccagttgtaacgccatctcaagatatggtcctaggtaac
tactacctgactatggaagaagcaggtcgcgaaggcgaaggtatggtcttcaaagatatg
gatgaagctgtcatggctcttcgcaatggttatgtgcatttgcatactcgtgtaggtatc
acaaccgatagcctggcgaaaccatggactgagtcgcaaaaacataaaattttgatgacc
acagttggtaaaattctctttaatgcgattatgccggaagaattgccttatctgcaagag
ccaaccaatgctaacttgactgaaggtgttccggataagtacttcttagaatcaggaaaa
gatatcaaggaagccattcaagctcttgaattgaatgtaccatttaagaagaaaaatctt
ggtaatatcatcgctgaaatcttcaaacgcttccgtacaacagaaacatctgccctgctt
gaccgcttgaagaacttgggttaccaccattctactttagctggtttgacagtgggtatc
gctgatattccggttgtcgaagataaggctgagattatcgaagaatctcacaaacgtgta
gaacaaatcactaaacaattccgccgtggtatgatcacagacgacgaacgctacaatgct
gtcactgctgaatggcgtgctgcccgtgaaaaacttgaaaaacgtttggttgccaaccaa
gatccgaagaaccctatcgttatgatgatggactctggagcgcgtggtaacatctcaaac
ttctcacagcttgccggtatgcgtggtttgatggctgcgccaaacggacgtatcatggaa
ttgccaatcttgtctaacttccgtgaaggtttgtcagtactcgaaatgttcttctcaact
cacggagctcgtaaaggtatgacggatacggcccttaagacagccgactctggttatctg
acacgtcgtttggttgacgttgctcaagacgttatcatccgtgaagacgactgtggaaca
gatcgtggactccttatcacttctatcacagatggtaaggaaatgatcgaaccccttgaa
gaacgtttggttggtcgctatactaagaaatctattaaacatcctgagacaggggaagtc
ctagttcctgctgatgttcttgtaactgaggatatggcgcgtcaagttgttaatgctggc
gtgacggaagtcacaatccgtagcgttctaacttgcaacactcgtcacggtgtctgccgt
cactgttatggtattaacttggcaactggtgatgcggttgaagtgggtgaagcagtcgga
acaatcgctgctcaatctatcggggaacctggtactcagttgaccatgcgtaccttccac
acgggtggtgttgcttcaagctcagatatcacgcaaggtcttcctcgtgtccaagaaatc
tttgaagcccgtaatccgaaaggggaagcggttatcactgaagtcaagggtgaagttact
gccattgaagaagatgcatctactcgtaccaagaaggtctttgttaaaggtcaaactggt
gaaggtgagtatgtggtgccatttacagctcgtatgaaagttgaagtgggtgaccaagtg
tctcgtggtgcggctttgaccgaaggatcaatccaacctaagcacttgctagctgttcgt
gatgtcttgtccgttgaaacttacctgcttgctgaggtacagaaagtttaccgtagccaa
ggggtagaaatcggagacaaacacatcgaagtaatggttcgtcaaatgatccgtaaagta
cgtgtcatggatccaggtgatacagatcttctcatgggaactcttatggatattacagac
tttacagatgctaaccgtgatgtagttatctcaggtggtgtacctgcgacagctcgtcca
gtcctcatgggaatcaccaaagcttcccttgagacaaacagcttcctgtctgcagcttcc
ttccaggaaacaactcgtgtcttgactgatgcggctatccgtggtaagaaagatcatctg
cttggtcttaaggaaaatgttatcatcggtaagattatccctgctggtactggtatggct
cgctaccgtaacttggaaccacaagctatcaatgaagtagaaattattgatgaagttgtg
gtgactccagaagacgtagagtctactgaaacactagtcacagaataa
DBGET
integrated database retrieval system
