Streptomyces gobiensis: test1122_02245
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Entry
test1122_02245 CDS
T08145
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03030
DNA replication
sgob03430
Mismatch repair
sgob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
test1122_02245
03430 Mismatch repair
test1122_02245
03440 Homologous recombination
test1122_02245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgob03032
]
test1122_02245
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_02245
Enzymes [BR:
sgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
test1122_02245
DNA replication proteins [BR:
sgob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
test1122_02245
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
test1122_02245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
BRCT
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UGY90657
LinkDB
All DBs
Position
462330..463352
Genome browser
AA seq
340 aa
AA seq
DB search
MLEDQTAAAPQIPAQQQAAAPVWPSGYPDGYAVVDVETTGLARDDRIVSAAVYRLDAQGN
VEDRWYSPVNPQRDPGPTWIHGLTSDMLADAPLFPEIAEEFAARLADRVLVAHNALFDWS
MIAREYARARRTAPVRQRLCTIALAKELSLPLPNHKLESLAAHYGVVQERAHHALDDARV
LAEAFRPSLHLAAQGGVRLPLLACQPLTEWSDSRYGGGAVTSGGYRAQPYGGTSWRPARK
RPACPYPNPGRYQPGGRLTQGMRVAISGDTCTDRELLEDRAIEAGLHIASSVSRLTSLLV
TNDPDAVTSKVTKARSFGTPVIDEAAFTQLLQDVAPAPKG
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagaccagacggcagccgcaccgcagattcccgcgcagcagcaagccgccgcc
cccgtatggccgtcgggctatccggacggctatgcggtggtggacgtggagaccaccggg
ctggcgcgtgatgaccggatagtgtccgcagccgtctaccgtctggacgcccagggcaat
gttgaggaccgctggtactcgccggtcaatccacagcgcgatcccggaccgacctggatt
cacggactcaccagcgacatgctcgccgacgcaccgctcttcccggagatcgccgaggag
ttcgcggcccggctggcggaccgggtgctggtcgcgcacaacgcgctcttcgactggtcg
atgatcgcccgggagtacgcgcgggcgaggcgcaccgcgcccgtaaggcagcggctgtgc
acgatcgcactcgccaaggagctgtccctgccgctgcccaaccacaagctggaatcgctc
gccgcgcactatggcgtcgtacaggaacgagcgcaccacgcgctcgacgatgcccgggtg
ctggccgaggccttccggccgagtctgcatctggccgcccaggggggagtccggctgccg
ctgctggcctgtcagccgctcaccgagtggtcggacagccggtacggcggcggtgcggtc
acctccggtgggtaccgtgctcaaccgtacgggggaaccagctggcggcccgcgcgtaaa
cggcccgcctgcccgtatcccaacccgggccgttatcagccgggcgggcggctcacgcag
ggcatgcgcgtggcgatctccggtgacacctgcaccgaccgcgagctgctggaggaccgg
gcgatcgaggcggggctgcatatcgccagcagcgtctcgcggctcaccagcctgctggtg
accaatgacccggacgccgtcacctcgaaggtgaccaaggcccgttcctttggcaccccg
gtcatcgacgaagccgccttcacccagctcctccaggacgtggcccccgcgccgaagggc
tga
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