Streptomyces gobiensis: test1122_03630
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Entry
test1122_03630 CDS
T08145
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
test1122_03630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_03630
Enzymes [BR:
sgob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
test1122_03630
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
test1122_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
UGY94999
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All DBs
Position
786632..787531
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AA seq
299 aa
AA seq
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MDTVSTPQHSSTPARSRNPIGGHVPVAGGLAATGISYAREIGAEALQVFVANPRGWATPV
GSSAQDEAFRAACAAEYLPAYIHAPYLINFGSHTEVTVDRSVISLRHSLRRGREIGALGV
VVHTGSATGGRERSVALAQVRDRMLPLLDELTHDDDPWLLLEPTAGQGASLCALAEDLGP
YFDALDRHPKLGVCLDTCHAFAAGHDLAAPGGTKALLDELVTVTGEGRLKLIHANDSKDV
VGAHKDRHENIGSGHIGAEPFRELFLHPATEGVPLVIETPGGKEGHTADVAGLKSLRDV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
ctggatacggtgagcactccccagcactccagcaccccggcccgcagccgtaacccgatt
ggcggccatgtccccgtagccggtggactggccgccacgggcatttcctacgcccgtgag
atcggcgccgaggctctacaggtctttgtcgccaatccgcgcggctgggccacgcccgtc
ggcagctccgcacaggacgaggcgttccgcgcggcctgtgccgccgagtaccttccggcc
tacatccacgccccgtatctgatcaacttcggctcacacaccgaggtgacggtcgacagg
tccgtgatctccctgcggcactcgctgcgccggggccgggagatcggcgccctgggcgtg
gtcgtccacaccggctccgcgaccggcggccgcgagcgctccgtagccctcgcccaggta
cgggaccggatgctgccgctgctggatgagctgacgcacgacgacgatccatggctgctg
ctggagccgaccgccgggcagggtgcctcgctctgtgcgctggctgaggatctgggcccg
tacttcgacgccctggaccgccatccgaagctcggcgtctgtctcgacacctgccacgcc
ttcgccgccgggcacgatctggcggcgccgggcgggaccaaggcactgctggacgagctg
gtgacggtcaccggcgaggggcggctgaagctcatccacgccaatgactccaaggatgtc
gtcggcgcccacaaggaccgtcacgagaacatcggcagcggccatatcggggccgagccc
ttccgtgagctcttcctccacccggctaccgagggggtgcccctggtgatcgagactccg
ggcggcaaggagggtcacacagcggacgtagccggcctgaagtcgctgcgcgacgtctga
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