Streptomyces gobiensis: test1122_05990
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Entry
test1122_05990 CDS
T08145
Name
(GenBank) AMP-dependent synthetase/ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob00061
Fatty acid biosynthesis
sgob00071
Fatty acid degradation
sgob01100
Metabolic pathways
sgob01212
Fatty acid metabolism
sgob02024
Quorum sensing
sgob04146
Peroxisome
Module
sgob_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
test1122_05990
00071 Fatty acid degradation
test1122_05990
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
test1122_05990
09145 Cellular community - prokaryotes
02024 Quorum sensing
test1122_05990
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sgob01004
]
test1122_05990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sgob04147
]
test1122_05990
Enzymes [BR:
sgob01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
test1122_05990
Lipid biosynthesis proteins [BR:
sgob01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
test1122_05990
Exosome [BR:
sgob04147
]
Exosomal proteins
Exosomal proteins of breast milk
test1122_05990
Exosomal proteins of breast cancer cells
test1122_05990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
UGY91311
LinkDB
All DBs
Position
complement(1278567..1280513)
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AA seq
648 aa
AA seq
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MAERRAPSVPAVRTPPGVPLPDAPVPDLVEPALRVIGGSVREVFSPPLAPPVDHGSLADI
PFDNAAAAPGDAVFARKQPDGSWREVSCAEFAEEVLATARGLIASGLRPGERLGIMARTT
YEWTLLDFAGWAAGLITVPIYPTSSAHQARWILQDAGVSAVVVENVEGARLVSGLRGGLP
GLAHIWQLDNGAIAQLIDAGREIPDSWVTERRSALTPHAVATVIYTSGTTGSPKGCLITH
GNFFAEVDNAIELLYPIFKAVSSEPASTLLFLPMSHVFGRMVAVGCQRARVKVGHAPSIE
TQELLSDLASFRPTFLLAIPYVLEKVYNTARATAESMRRGASFDRAAWIATRWGENWTDA
RGGNGKGPGIAVRAARGLYDPLVYRRIRSALGGRVRYMICGGSQLGKRLGAFYAGAGIEV
FEGYGLTESTAAATVTSPLRPKLGTVGWPMPGTAVRIAEDGEILLKGRHIFGGYWDGQRQ
VTVPHTDADGWLPTGDIGSLDAEGYLTISGRKKDLIVTSQGKNLAPAPLEDWLRAHPLVS
QALVIGDNRPYITALITLEPDGLAHWCRMHKKEGVPVEELVHDGDLRHNLQQAVSGANTL
VSRAESIRRFVILPVDFTEASGHLTPSMKLKREAITQDFAAEIDALYR
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaaggcgagccccgtccgtccccgccgtccgcaccccgcccggcgttccgctc
cccgacgccccggttcccgacctcgtcgagcccgccctgcgggtcatcgggggctcggtg
cgggaagtcttctcaccaccgctcgcgccgcccgtcgaccacgggtcgcttgccgacatc
ccgttcgacaacgccgccgcggcgccgggggacgccgtgttcgcacgtaagcagcccgac
ggcagctggcgtgaggtgagctgtgccgagttcgccgaggaggtcctggccaccgcgcgg
gggctgatcgccagtggtctgcgcccgggtgagcggctcggcatcatggcgcgtacgacc
tatgagtggacgctgctcgacttcgcgggctgggctgccggactgatcaccgtacccatc
tatccgaccagctccgcccaccaggcccgctggatactccaggacgccggtgtctccgca
gtcgtggtggagaacgtcgagggcgcccggctggtcagcggcctccggggcggactcccg
ggtctggcccacatctggcagctggacaacggggccatcgcccagctcatcgacgcgggc
cgggagatacccgacagctgggtgaccgagcgccggtccgccctcaccccgcacgctgtg
gccacggtcatctacacctcgggcacaacgggttctcccaagggctgtctcatcacccat
ggcaacttcttcgccgaggtcgacaacgccatcgagctgttgtacccgatcttcaaggcg
gtcagttcggagcccgcctccaccttgctgttcctgccgatgtcccatgtcttcggccgg
atggtggcggtcggctgtcagcgggcgcgggtcaaggtcgggcacgccccgagcatcgag
acgcaggagctgctctccgaccttgcgagcttccggccgacgttcctgctggccatcccg
tatgtgctggagaaggtctacaacaccgcgcgggccacggccgagtccatgcggcgcggc
gcgtccttcgaccgcgctgcctggatcgccacccggtggggcgagaactggaccgacgcc
cggggtggcaatggcaaggggccggggatcgcggtccgggcggcgcgcgggctgtacgac
ccgctggtgtaccgccgtatccgctccgcgctcggcggcagggtgcggtacatgatctgt
ggcggttcccagctgggcaagcggctcggtgccttctacgccggggcggggatcgaggtc
ttcgaggggtacgggctgacggagtccacggcggccgccaccgtcacctcgccgctccgg
ccgaagctgggcacggtcggctggccgatgcccgggacggcggtacggatcgccgaggac
ggggagatcctgctgaagggccgtcatatcttcggcggctactgggacgggcagcggcag
gtcaccgtcccccatacggatgccgacgggtggctgcccaccggcgacatcggctccctg
gacgccgaggggtacctgacgatcagcgggcggaagaaggatctgatcgtcacgtcccag
ggcaagaacctcgccccggccccgctggaggactggctgcgcgcccacccgctggtcagc
caggccctggtgatcggcgacaaccgcccgtacatcacggccctgatcacgctggagccg
gacggtctcgcgcattggtgccggatgcacaaaaaggagggtgtcccggtcgaggagctg
gtgcacgatggggatctccggcacaacctgcagcaggcggtgagcggggcgaacacgctg
gtatcgcgggcggagtccatccgtcggttcgtgatactgccggtggactttacggaggct
tccgggcatctgacgccgtcgatgaagctgaagcgggaggcgatcacgcaggacttcgcg
gcggagatcgacgcgctgtacaggtga
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