Streptomyces gobiensis: test1122_06305
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Entry
test1122_06305 CDS
T08145
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
sgob
Streptomyces gobiensis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sgob03016
]
test1122_06305
Enzymes [BR:
sgob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
test1122_06305
Transfer RNA biogenesis [BR:
sgob03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
test1122_06305
Prokaryotic type
test1122_06305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
UGY91370
LinkDB
All DBs
Position
complement(1341213..1342136)
Genome browser
AA seq
307 aa
AA seq
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MSVRELVVLGTASQVPTRHRNHNGYFLRWDSEGILFDPGEGTQRQMVRAGVAAHDLTRLC
VTHFHGDHSLGLAGVIQRINLDRVPHLVTAHFPASGQRFFDRLRYATAYRETVQLHEEPV
RSSGALATTPAFTLTARKLSHPVESYGYRLVEPDGRRMLPDRLAAHGITGPDIGRLQRAG
ELRGVPLTEVSEHRPGQRFAFVMDTRLCDGAYELADGCDMLVIEATFLDEDAGLAKEYGH
LTAGQAGRIAAVSGVRHLVLTHFSQRYSAPEAAEVFAAQARAAGFEGELTVARDLLRVPV
PKRAASG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagttcgcgaactggtcgttctcggcaccgccagtcaggtcccgacccggcaccgc
aaccacaacggctatttcctgcgctgggacagcgagggcatcctcttcgaccccggcgag
ggtacgcagcgtcagatggtgcgcgccggggtggccgcgcacgatctcacccggctgtgc
gtcacccacttccacggcgaccactcactgggcctggccggggtcatccagcgcataaac
ctcgaccgggtgccacacctggtcaccgcccacttcccggccagcggccagcgcttcttc
gaccggctgcgctacgccaccgcgtaccgcgagacggtgcagctccacgaggagccggtc
cgttcctccggagccctggccaccacacccgccttcaccctgaccgcccgtaagctctcc
catccggtggagtcctatggctaccggctcgttgagcccgacggccgccggatgttgccc
gaccggctcgccgcccatggcatcacggggccggacatcggccgcctccagcgggcgggc
gagctgcgcggcgttccgctcaccgaggtgagtgagcaccgccccggccagcgcttcgcc
ttcgtcatggacacccgtctgtgcgatggagcctatgaactggcggacggctgcgacatg
ctcgtcatcgaggccaccttcctggacgaggatgccggcctcgccaaggagtacggccac
ctgaccgcgggacaagcgggccggatcgccgccgtatccggggtccgccacctcgtcctc
acccacttctcccagcggtacagcgcacccgaggccgctgaggtcttcgcggcgcaggcc
cgcgcggcgggcttcgagggtgagctcaccgtcgcccgggacctgctgcgggtcccggtg
cccaagcgggcagcgtctgggtaa
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