Streptomyces gobiensis: test1122_07180
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Entry
test1122_07180 CDS
T08145
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
test1122_07180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_07180
Enzymes [BR:
sgob01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
test1122_07180
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
test1122_07180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HHH_RecD2
AAA_19
AAA_30
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
AAA_22
TraI_hel_assoc_N
NAT10_TcmA_helicase
NPHP3_N
PhoH
PIF1
AAA_16
HHH_2
HTH_IclR
nSTAND3
DEAD
AAA
TrwB_AAD_bind
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
UGY91527
LinkDB
All DBs
Position
complement(1549057..1551312)
Genome browser
AA seq
751 aa
AA seq
DB search
MSFPPAVLEGVLERITYANEDNGYTVARIAPLKRKDRGHDGDLLTVVGSLLGAQPGESLR
MEGRWGSHPQYGRQFTVENYTTVLPATVQGIRRYLGSGLIKGIGPRIAERIVDHFGTDTL
DVIEADPKRLIEVPGLGPKRTDKIAAAWEEQKAIKEVMVFLQGVGVSTSVAVRIYKKYGD
ASISVVRNQPYRLAAEVWGIGFLTADRIAQSVGIPHDSPERVKAGLQYALSQSTDQGHCY
LPEEQLIADAVKLLQVDTGLVIDCLGELAGEEEGVVREQVPDPQAAADPAGARTISAVYL
VPFHRAEISLAAQLLRLLRAPEDRIPAFADVDWERALAWLAQRTGADLAPEQRDAVKLAL
TERVAVLTGGPGCGKSFTVRSVVELARAKKAKVVLAAPTGRAAKRLAELTGAEASTVHRL
LELKPGGDAAYDRDRPLDADLVVVDEASMLDLLLANKLIKAVPPGAHLLLVGDVDQLPSV
GAGEVLRDLLADGGPVPAVRLTRIFRQAQQSGVVTNAHRINSGVPPITQGMPDFFLFAEE
DTEEAGRLTVDVAARRIPAKFGLDPRRDVQVLAPMHRGPAGAGTLNGLLQQAVTPARPEL
PEKRFGGRVFRVGDKVTQIRNNYEKGANGVFNGTVGVVTGINLDDQRLTVLTDEDEEVPY
DFDELDELAHAYAVTIHRSQGSEYPAVVIPVTTGAWMMLQRNLLYTAVTRAKRLVVLVGS
RKALGQAVRTVSAGRRGTALAYRLRGAVGGA
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcccacccgcggtgctcgagggggtccttgagcgcatcacctacgccaatgag
gacaacggatacaccgtggcgcggatcgcgccgctgaagcggaaggaccggggccacgat
ggcgatctgctcacggtcgtcggctcgctgctgggcgcgcagccaggggaatcgctgcgg
atggagggccgctggggctcgcacccgcagtacggccgtcagttcaccgtcgagaactac
accaccgtgctgcccgccaccgtgcagggtatccggcgctatctcggctcaggcctgatc
aagggcatcggtccgcggatcgccgagcggatcgtcgaccacttcggcaccgacaccctg
gatgtcatcgaggcggaccccaagcggctgatcgaggtgcccgggctcggtcccaagcgg
acggacaagatcgcggctgcctgggaggagcagaaggccatcaaggaggtgatggtcttt
ctgcagggggtcggggtctccacctctgtcgccgtccgtatctacaagaagtacggcgac
gcgagcatctccgtggtgcggaaccagccctaccggctggccgccgaggtctggggcatt
ggcttcctcaccgccgaccgcatcgcccagtcggtcggtataccccacgacagcccggag
cgggtgaaggccgggctgcagtacgcgctgtcccagtccaccgatcaggggcactgctat
ctccccgaggaacagctgatcgcggacgccgtcaagctcctccaggtggacaccggcctg
gtcatcgactgcctcggggagctggcgggtgaggaggagggggtcgtacgggagcaggtg
cccgacccgcaggccgcggctgacccagcgggggcgcgcaccatctccgcggtctatctg
gtgcccttccaccgggccgagatctcgctcgccgcccagctgctgcggctgctgcgggcc
ccggaggaccgtatccccgccttcgcggacgtcgactgggagcgggccctggcctggctc
gcccagcgcaccggggcggatctcgcccccgagcagcgggacgcggtgaagctggcgctg
accgagcgggtcgcggtgctcaccggcggtcccggctgcggtaagtccttcaccgtgcgg
tcggtggtcgagctggcccgggcgaagaaggccaaggtcgtcctggcggcccccaccggg
cgggccgccaagcggctggcggagctgaccggggcggaggcatccaccgtgcaccggctg
ctggagctcaagccgggcggcgacgcggcgtatgaccgggaccgtccgctcgacgccgat
ctggtcgtcgtcgatgaggcgtcgatgctggatctgctgctcgccaacaagctgatcaag
gcggtgccgccgggcgcccatctgctgctggtgggcgatgtcgaccagctgccttcggtc
ggcgcgggcgaggtgctgcgggatctgctcgcagacggcgggcccgtcccggccgtgcgg
ctcacccggatcttccggcaggcccagcagtccggggtggtgaccaacgcccaccgcatc
aactccggggtgccgcccatcacccaggggatgccggatttctttctcttcgccgaggag
gacaccgaggaggccgggcggctcaccgtcgatgtggccgcccgccgtatccccgccaag
ttcggtctggacccgcgccgggatgtccaggtgctggcgccgatgcaccgtggcccggcg
ggcgcggggaccctcaacggcctgcttcaacaggccgtcaccccggcccggccggaactg
cccgaaaagcgcttcggagggcgggtcttccgggtaggggacaaagtaacgcagatccgt
aataactatgagaagggtgccaatggtgtcttcaacggcaccgtcggtgtggtcaccggc
atcaacctcgacgatcagcggctgaccgtgctgacggacgaggacgaggaggtgccgtat
gacttcgatgagctggatgagctggcccatgcctacgcggtgaccatccaccgctcccag
ggcagcgaatacccggccgtggtgattccggtcaccacgggcgcgtggatgatgcttcag
cgaaacttgctctatacggccgtcacccgggcgaagcgtctagtggtgctggtgggctcc
cgaaaggcgcttggccaggccgtacggaccgtctcagccggtcggcgcgggaccgccctg
gcctaccgattgcgtggcgcggtcggcggcgcgtag
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