Streptomyces gobiensis: test1122_08715
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Entry
test1122_08715 CDS
T08145
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sgob
Streptomyces gobiensis
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sgob03021
]
test1122_08715
Transcription machinery [BR:
sgob03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
test1122_08715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
MarR_2
HTH_Crp_2
HTH_24
HTH_10
HTH_3
GerE
MarR
DUF7343
Sigma70_ECF
KORA
HTH_AraC
DUF1492
Apolipoprotein
Motif
Other DBs
NCBI-ProteinID:
UGY95080
LinkDB
All DBs
Position
1895361..1896326
Genome browser
AA seq
321 aa
AA seq
DB search
MEDTMSPQLDESRTERSVTDHDAYETAPAAPSTTPPEQIETEIDGAAIEELFDQLAGIPP
IPPFDEVGPLDARALSKTLFERLESLEEGTHEYAYVRNTLVELNLALVKFAASRFRSRSE
PMEDIVQVGTIGLIKAIDRFELGRGVEFPTFAMPTIVGEIKRFFRDTSWSVRVPRRLQEL
RLDLAKAGDELAQRLDRAPTVAELAERLSISKDEVVEGMAASNAYTASSLDAQPEEDDTE
GALADRIGYEDHGLEGIEYVESLKPLIAELSSRDRKILSLRFVANMTQSEIGEELGISQM
HVSRLLSRTLGKLRKGLMIEE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaggacaccatgtcaccccagctcgacgagtcgcgcaccgagcggagcgtcaccgac
cacgacgcctatgagaccgcaccggccgcgccgtcgacaaccccgcccgaacagatcgag
accgagatcgacggcgcggccatcgaggaactcttcgatcagctcgctggaattccgccg
attccaccgttcgacgaggtggggccgctggatgcacgagccctgtccaagaccctcttc
gagcgtcttgaatcccttgaagagggcacgcatgaatatgcgtacgtacgcaacaccctg
gtcgagctgaatctcgcactggtgaagttcgcggcctcccggttccgctcccgcagtgaa
cccatggaggacatcgtccaggtcggcaccataggcctgatcaaggcgatcgaccgtttt
gagctcggccgcggcgtcgagttccccaccttcgccatgccgacgatcgttggcgagatc
aagcgcttcttccgcgacacctcctggtccgtgcgcgtcccgcgccgtctgcaggagctc
cgcctcgacttggccaaggcgggcgacgaactggcccagcggctggaccgcgcccccacg
gtggccgagctggccgagcgcctcagcatctccaaggatgaggtcgtcgagggcatggcc
gcgagcaacgcgtacaccgcgagctcgctcgacgcccagcccgaggaagacgacaccgag
ggcgccctcgcggaccgtatcggctatgaggaccatggactcgaaggcatcgagtacgtc
gaatcactcaagccgcttatcgccgaactctcctcgcgtgaccggaagatactttcgctg
cgcttcgtagcgaatatgacccagtccgagatcggtgaggagctgggtatctctcagatg
catgtctcccggctgctgtcccgcaccctgggcaagctccgcaaggggctgatgatcgaa
gagtga
DBGET
integrated database retrieval system
