Streptomyces gobiensis: test1122_11795
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Entry
test1122_11795 CDS
T08145
Name
(GenBank) TerD family protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sgob
Streptomyces gobiensis
Pathway
sgob03030
DNA replication
sgob03430
Mismatch repair
sgob03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sgob00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
test1122_11795
03430 Mismatch repair
test1122_11795
03440 Homologous recombination
test1122_11795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sgob03032
]
test1122_11795
03400 DNA repair and recombination proteins [BR:
sgob03400
]
test1122_11795
Enzymes [BR:
sgob01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
test1122_11795
DNA replication proteins [BR:
sgob03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
test1122_11795
DNA repair and recombination proteins [BR:
sgob03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
test1122_11795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TerD
RNase_T
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UGY92344
LinkDB
All DBs
Position
2565088..2566947
Genome browser
AA seq
619 aa
AA seq
DB search
MAVLSSSPKWPTVPDYFHDWALVDVETSGLRPGRDRALSLAVLTLDGHGRQTGEFSTLLN
PGCDPGPVHIHGLTPARLAGAPTFEEIAPQVGALLSSRVLVAHNAQFDYDFLAHEFARVR
SWVPVSRRLCTLALNRLVGPVTPDLKLGTLAAHYGVRQERAHDARDDVRVLSGVLQGSLD
AAKQLGLPLPLLSCPPRQDYKPYVPKTPCAYRNPGRLAEGGPLVQGMKVAITGDTQVSRE
ELAARSVAAGLNMMTSVSGQTSVVVTNDPGAASGKLRRAAAEGVPLVDEPTYLQLLENVQ
PGQAKGTARAGTAGQRRTAETPGNARTAKSTPTPDVPAQPTTAPTTPTADADRSLAGRRV
LVLGGTHEEAAAARARVVALGASAAVNLSARVTDILVLPGGESDRRMSRIASLGLRVHDA
DWLLAPAPAPIPTSAQSTPGNQPDTAEVLVRGAVIDLPDADTAWTVAATWGQHTACDVDV
AAFTLDAHEQVAGDEDFVFYNAPEHPDGTVRLATDSPTEQAVTADLDRLPLEVSRVVIAA
AIDGAATFSDVGAIEITVTCGIGESPTARATLDAATTERTLILAEIYRRGDGWRLRAVGQ
GYDHGLADLARGYGVDVTE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgctgtcgtcgagtccgaagtggcccaccgtgcccgactacttccacgactgg
gcgctggtggatgtggagacctccgggctgaggcccggcagggaccgcgccctttccctg
gcggtcctcacgctcgacggacacggccggcagacaggagagttctccactctcctcaat
ccgggctgcgaccccggcccggtgcacatccatggcctcaccccagcgcgtcttgcgggc
gcgcccaccttcgaggagatagcgccgcaggtgggggcactgctcagcagccgcgtcctg
gtcgcccacaacgcgcagttcgactacgacttcctggcccatgagttcgcccgtgtccgt
tcctgggtcccggtcagcagacgcctgtgcactctggcgctcaaccgcctggtcgggccc
gtgacgcccgacctcaagctgggcactctcgccgcgcactatggcgtgcgccaggaacgg
gcccacgacgcgcgggacgatgtacgggtgctctcgggcgtcctgcagggctcgttggac
gccgccaagcagttgggcctgcccttgccgctgttgtcctgcccaccccgccaggactac
aagccctacgtccccaagaccccctgcgcctaccgcaatccgggccgcctggcggagggc
gggccactggtgcaggggatgaaggtcgccatcaccggggacacccaggtctcccgcgag
gaactggccgcccgctcggtggcggccgggctgaacatgatgacctcggtcagcggccag
accagcgtcgtcgtcaccaacgatcccggcgccgcatccggcaaactgcgtcgcgccgca
gccgagggcgtccccctcgtggacgagccgacctacctccagctgctggagaatgtgcag
cccggccaggccaagggcaccgcccgcgccggcaccgccgggcaacgccgcacggccgag
acacctggtaacgcgaggaccgcaaagtccacgcccacgccggacgtccccgcacagccc
accactgcaccgaccacacccaccgccgacgcggaccggtcgctggccgggcgtcgggtc
ctggtcctgggcggcactcacgaggaggccgcggcggcacgcgctcgcgttgtcgccctc
ggtgcctccgcagcggttaacctctcggccagagtgaccgacatcctggtgctgcccggc
ggcgaatcggaccggcgtatgagccgcatcgcctcccttggactacgcgtgcacgacgcc
gactggctcctcgcacccgcccctgccccgatacccacgtcggcacagagcacgcccgga
aaccagccggacacggcagaggtactggtccgaggcgccgtcatcgacctgcccgacgcc
gacacagcctggacggtggccgccacgtggggccagcacaccgcctgcgacgtggacgtc
gccgccttcacactcgacgcgcatgagcaggtggcaggggacgaggacttcgtcttctac
aacgcgcccgaacacccggacggcaccgtacggctcgccacggacagcccgacggagcag
gctgtcaccgccgacctggatcggctgcccttggaagtcagccgggtcgtcatcgccgcc
gcgatcgacggcgccgcgacattctccgacgtcggcgccatcgagatcaccgtcacctgc
gggatcggcgagtccccgaccgcccgggccaccctcgacgctgccaccaccgagcgcacc
ctgatccttgccgagatctaccgccgaggcgacggctggcggctgcgcgccgtcggacag
ggctacgaccacggcctggccgacctggcccggggctacggcgtcgacgtcaccgaatga
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